Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.22■■□□□ 1.31
NCLP19338 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.22■■□□□ 1.31
NCLP19338 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
NCLP19338 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.22■■□□□ 1.31
NCLP19338 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NCLP19338 HTR7P1-202ENST00000624664 4411 ntBASIC23.22■■□□□ 1.31
NCLP19338 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCLP19338 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCLP19338 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCLP19338 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.21■■□□□ 1.31
NCLP19338 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCLP19338 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
NCLP19338 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NCLP19338 CROCCP5-201ENST00000436658 830 ntBASIC23.21■■□□□ 1.31
NCLP19338 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCLP19338 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.21■■□□□ 1.31
NCLP19338 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.21■■□□□ 1.31
NCLP19338 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NCLP19338 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.21■■□□□ 1.31
NCLP19338 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NCLP19338 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.21■■□□□ 1.31
NCLP19338 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCLP19338 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.21■■□□□ 1.31
NCLP19338 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.21■■□□□ 1.31
NCLP19338 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.21■■□□□ 1.31
NCLP19338 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC23.21■■□□□ 1.31
NCLP19338 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCLP19338 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCLP19338 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NCLP19338 NEFHP1-201ENST00000412845 2629 ntBASIC23.21■■□□□ 1.31
NCLP19338 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCLP19338 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
NCLP19338 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC23.2■■□□□ 1.3
NCLP19338 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
NCLP19338 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NCLP19338 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.2■■□□□ 1.3
NCLP19338 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NCLP19338 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.2■■□□□ 1.3
NCLP19338 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.2■■□□□ 1.3
NCLP19338 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.2■■□□□ 1.3
NCLP19338 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
NCLP19338 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.2■■□□□ 1.3
NCLP19338 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.2■■□□□ 1.3
NCLP19338 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.2■■□□□ 1.3
NCLP19338 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.2■■□□□ 1.3
NCLP19338 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.2■■□□□ 1.3
NCLP19338 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.2■■□□□ 1.3
NCLP19338 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
NCLP19338 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NCLP19338 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NCLP19338 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
NCLP19338 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NCLP19338 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NCLP19338 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NCLP19338 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCLP19338 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
NCLP19338 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCLP19338 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCLP19338 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCLP19338 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCLP19338 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC23.19■■□□□ 1.3
NCLP19338 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCLP19338 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.19■■□□□ 1.3
NCLP19338 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.19■■□□□ 1.3
NCLP19338 CDV3P1-201ENST00000471403 739 ntBASIC23.19■■□□□ 1.3
NCLP19338 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NCLP19338 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NCLP19338 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.19■■□□□ 1.3
NCLP19338 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NCLP19338 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.19■■□□□ 1.3
NCLP19338 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC23.19■■□□□ 1.3
NCLP19338 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCLP19338 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NCLP19338 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCLP19338 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCLP19338 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NCLP19338 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NCLP19338 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCLP19338 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCLP19338 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
NCLP19338 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NCLP19338 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.18■■□□□ 1.3
NCLP19338 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.18■■□□□ 1.3
NCLP19338 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
NCLP19338 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
NCLP19338 MYCNOS-205ENST00000641950 531 ntBASIC23.18■■□□□ 1.3
NCLP19338 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC23.18■■□□□ 1.3
NCLP19338 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCLP19338 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCLP19338 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.18■■□□□ 1.3
NCLP19338 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCLP19338 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NCLP19338 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.17■■□□□ 1.3
NCLP19338 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NCLP19338 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NCLP19338 AC026471.1-201ENST00000564629 3026 ntBASIC23.17■■□□□ 1.3
NCLP19338 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
NCLP19338 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.17■■□□□ 1.3
NCLP19338 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NCLP19338 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms