Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.61■□□□□ 0.89
ERBB2P04626 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ERBB2P04626 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERBB2P04626 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ERBB2P04626 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERBB2P04626 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ERBB2P04626 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.6■□□□□ 0.89
ERBB2P04626 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
ERBB2P04626 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERBB2P04626 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERBB2P04626 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
ERBB2P04626 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERBB2P04626 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.6■□□□□ 0.89
ERBB2P04626 KRT18P16-201ENST00000510337 1294 ntBASIC20.6■□□□□ 0.89
ERBB2P04626 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ERBB2P04626 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ERBB2P04626 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ERBB2P04626 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERBB2P04626 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
ERBB2P04626 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERBB2P04626 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERBB2P04626 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERBB2P04626 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERBB2P04626 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ERBB2P04626 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERBB2P04626 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERBB2P04626 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.59■□□□□ 0.89
ERBB2P04626 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.59■□□□□ 0.89
ERBB2P04626 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.59■□□□□ 0.89
ERBB2P04626 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ERBB2P04626 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERBB2P04626 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.59■□□□□ 0.89
ERBB2P04626 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERBB2P04626 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
ERBB2P04626 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERBB2P04626 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ERBB2P04626 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ERBB2P04626 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ERBB2P04626 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ERBB2P04626 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.59■□□□□ 0.89
ERBB2P04626 NBPF21P-201ENST00000425093 1451 ntBASIC20.59■□□□□ 0.89
ERBB2P04626 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.59■□□□□ 0.89
ERBB2P04626 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ERBB2P04626 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ERBB2P04626 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.59■□□□□ 0.89
ERBB2P04626 FAM201B-201ENST00000458407 597 ntBASIC20.59■□□□□ 0.89
ERBB2P04626 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
ERBB2P04626 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERBB2P04626 RN7SL471P-201ENST00000580476 299 ntBASIC20.59■□□□□ 0.89
ERBB2P04626 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.59■□□□□ 0.89
ERBB2P04626 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.59■□□□□ 0.89
ERBB2P04626 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ERBB2P04626 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ERBB2P04626 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ERBB2P04626 AC116562.4-201ENST00000641316 2276 ntBASIC20.58■□□□□ 0.89
ERBB2P04626 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ERBB2P04626 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.58■□□□□ 0.89
ERBB2P04626 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ERBB2P04626 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.58■□□□□ 0.89
ERBB2P04626 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERBB2P04626 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.58■□□□□ 0.89
ERBB2P04626 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERBB2P04626 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERBB2P04626 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERBB2P04626 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERBB2P04626 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERBB2P04626 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERBB2P04626 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.58■□□□□ 0.89
ERBB2P04626 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.58■□□□□ 0.89
ERBB2P04626 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.58■□□□□ 0.89
ERBB2P04626 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
ERBB2P04626 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.58■□□□□ 0.89
ERBB2P04626 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ERBB2P04626 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.58■□□□□ 0.89
ERBB2P04626 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERBB2P04626 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.58■□□□□ 0.88
ERBB2P04626 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.58■□□□□ 0.88
ERBB2P04626 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
ERBB2P04626 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ERBB2P04626 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.58■□□□□ 0.88
ERBB2P04626 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ERBB2P04626 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ERBB2P04626 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ERBB2P04626 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.57■□□□□ 0.88
ERBB2P04626 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERBB2P04626 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ERBB2P04626 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERBB2P04626 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.57■□□□□ 0.88
ERBB2P04626 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERBB2P04626 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERBB2P04626 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ERBB2P04626 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERBB2P04626 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERBB2P04626 KRASP1-201ENST00000407852 552 ntBASIC20.57■□□□□ 0.88
ERBB2P04626 AC239809.2-201ENST00000415381 517 ntBASIC20.57■□□□□ 0.88
ERBB2P04626 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.57■□□□□ 0.88
ERBB2P04626 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ERBB2P04626 AC124016.1-201ENST00000609552 612 ntBASIC20.57■□□□□ 0.88
ERBB2P04626 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
ERBB2P04626 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms