Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HLA-DRAP01903 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DRAP01903 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
HLA-DRAP01903 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.09■□□□□ 0.97
HLA-DRAP01903 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DRAP01903 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
HLA-DRAP01903 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DRAP01903 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DRAP01903 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DRAP01903 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
HLA-DRAP01903 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DRAP01903 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.09■□□□□ 0.97
HLA-DRAP01903 KRT18P16-201ENST00000510337 1294 ntBASIC21.09■□□□□ 0.97
HLA-DRAP01903 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.09■□□□□ 0.97
HLA-DRAP01903 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.09■□□□□ 0.97
HLA-DRAP01903 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HLA-DRAP01903 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DRAP01903 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.09■□□□□ 0.97
HLA-DRAP01903 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DRAP01903 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DRAP01903 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.09■□□□□ 0.97
HLA-DRAP01903 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DRAP01903 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DRAP01903 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DRAP01903 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.09■□□□□ 0.97
HLA-DRAP01903 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DRAP01903 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DRAP01903 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DRAP01903 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.08■□□□□ 0.97
HLA-DRAP01903 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DRAP01903 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DRAP01903 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.08■□□□□ 0.97
HLA-DRAP01903 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.08■□□□□ 0.97
HLA-DRAP01903 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
HLA-DRAP01903 C1QBPP2-201ENST00000528754 825 ntBASIC21.08■□□□□ 0.97
HLA-DRAP01903 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.08■□□□□ 0.97
HLA-DRAP01903 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DRAP01903 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
HLA-DRAP01903 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DRAP01903 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
HLA-DRAP01903 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
HLA-DRAP01903 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HLA-DRAP01903 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
HLA-DRAP01903 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DRAP01903 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DRAP01903 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DRAP01903 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DRAP01903 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DRAP01903 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 AC133681.1-201ENST00000465482 601 ntBASIC21.07■□□□□ 0.96
HLA-DRAP01903 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.07■□□□□ 0.96
HLA-DRAP01903 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DRAP01903 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DRAP01903 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DRAP01903 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DRAP01903 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.06■□□□□ 0.96
HLA-DRAP01903 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DRAP01903 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
HLA-DRAP01903 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
HLA-DRAP01903 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DRAP01903 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DRAP01903 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DRAP01903 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DRAP01903 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.06■□□□□ 0.96
HLA-DRAP01903 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DRAP01903 RPPH1-201ENST00000516869 333 ntBASIC21.06■□□□□ 0.96
HLA-DRAP01903 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.06■□□□□ 0.96
HLA-DRAP01903 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.06■□□□□ 0.96
HLA-DRAP01903 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DRAP01903 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DRAP01903 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DRAP01903 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DRAP01903 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DRAP01903 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DRAP01903 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.06■□□□□ 0.96
HLA-DRAP01903 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DRAP01903 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DRAP01903 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
HLA-DRAP01903 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.05■□□□□ 0.96
HLA-DRAP01903 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.05■□□□□ 0.96
HLA-DRAP01903 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DRAP01903 TUBB8P6-201ENST00000436895 1288 ntBASIC21.05■□□□□ 0.96
HLA-DRAP01903 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.05■□□□□ 0.96
HLA-DRAP01903 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms