Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SNRNP200O75643 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP200O75643 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.79■□□□□ 0.6
SNRNP200O75643 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP200O75643 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP200O75643 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP200O75643 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.79■□□□□ 0.6
SNRNP200O75643 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.78■□□□□ 0.6
SNRNP200O75643 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP200O75643 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SNRNP200O75643 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP200O75643 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.78■□□□□ 0.6
SNRNP200O75643 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP200O75643 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
SNRNP200O75643 SNORA78-201ENST00000459373 127 ntBASIC18.78■□□□□ 0.6
SNRNP200O75643 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP200O75643 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.78■□□□□ 0.6
SNRNP200O75643 AC233702.5-201ENST00000584107 538 ntBASIC18.78■□□□□ 0.6
SNRNP200O75643 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.78■□□□□ 0.6
SNRNP200O75643 AP006294.2-201ENST00000641667 209 ntBASIC18.78■□□□□ 0.6
SNRNP200O75643 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.78■□□□□ 0.6
SNRNP200O75643 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SNRNP200O75643 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP200O75643 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP200O75643 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP200O75643 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.78■□□□□ 0.6
SNRNP200O75643 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP200O75643 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP200O75643 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.78■□□□□ 0.6
SNRNP200O75643 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.78■□□□□ 0.6
SNRNP200O75643 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNRNP200O75643 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SNRNP200O75643 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SNRNP200O75643 KRT18P16-201ENST00000510337 1294 ntBASIC18.77■□□□□ 0.6
SNRNP200O75643 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.77■□□□□ 0.6
SNRNP200O75643 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.77■□□□□ 0.6
SNRNP200O75643 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.77■□□□□ 0.6
SNRNP200O75643 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.77■□□□□ 0.6
SNRNP200O75643 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.77■□□□□ 0.6
SNRNP200O75643 REXO1L10P-201ENST00000615707 1290 ntBASIC18.77■□□□□ 0.6
SNRNP200O75643 REXO1L12P-201ENST00000622156 912 ntBASIC18.77■□□□□ 0.6
SNRNP200O75643 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.77■□□□□ 0.6
SNRNP200O75643 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNRNP200O75643 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNRNP200O75643 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNRNP200O75643 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNRNP200O75643 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNRNP200O75643 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNRNP200O75643 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNRNP200O75643 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.77■□□□□ 0.6
SNRNP200O75643 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.77■□□□□ 0.6
SNRNP200O75643 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.77■□□□□ 0.6
SNRNP200O75643 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.77■□□□□ 0.6
SNRNP200O75643 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.77■□□□□ 0.6
SNRNP200O75643 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SNRNP200O75643 AF186192.3-201ENST00000583427 947 ntBASIC18.77■□□□□ 0.6
SNRNP200O75643 CD177P1-201ENST00000606252 935 ntBASIC18.77■□□□□ 0.6
SNRNP200O75643 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNRNP200O75643 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP200O75643 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP200O75643 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.76■□□□□ 0.59
SNRNP200O75643 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP200O75643 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP200O75643 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP200O75643 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.76■□□□□ 0.59
SNRNP200O75643 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP200O75643 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.76■□□□□ 0.59
SNRNP200O75643 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP200O75643 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.76■□□□□ 0.59
SNRNP200O75643 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SNRNP200O75643 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP200O75643 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP200O75643 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SNRNP200O75643 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.76■□□□□ 0.59
SNRNP200O75643 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP200O75643 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP200O75643 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP200O75643 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP200O75643 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP200O75643 MIR718-201ENST00000390190 70 ntBASIC18.76■□□□□ 0.59
SNRNP200O75643 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SNRNP200O75643 TUBB8P6-201ENST00000436895 1288 ntBASIC18.76■□□□□ 0.59
SNRNP200O75643 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP200O75643 RPS2P4-201ENST00000476944 856 ntBASIC18.76■□□□□ 0.59
SNRNP200O75643 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.76■□□□□ 0.59
SNRNP200O75643 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.76■□□□□ 0.59
SNRNP200O75643 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP200O75643 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP200O75643 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
SNRNP200O75643 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRNP200O75643 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.75■□□□□ 0.59
SNRNP200O75643 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRNP200O75643 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRNP200O75643 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SNRNP200O75643 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.75■□□□□ 0.59
SNRNP200O75643 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.75■□□□□ 0.59
SNRNP200O75643 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
SNRNP200O75643 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.75■□□□□ 0.59
SNRNP200O75643 HTR7P1-201ENST00000538670 1336 ntBASIC18.75■□□□□ 0.59
SNRNP200O75643 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms