Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM3O75382 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM3O75382 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.24■□□□□ 0.51
TRIM3O75382 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRIM3O75382 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRIM3O75382 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM3O75382 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM3O75382 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM3O75382 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM3O75382 KRT8P17-201ENST00000453110 1448 ntBASIC18.23■□□□□ 0.51
TRIM3O75382 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM3O75382 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM3O75382 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRIM3O75382 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM3O75382 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM3O75382 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM3O75382 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
TRIM3O75382 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM3O75382 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM3O75382 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM3O75382 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
TRIM3O75382 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM3O75382 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM3O75382 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.23■□□□□ 0.51
TRIM3O75382 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
TRIM3O75382 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.23■□□□□ 0.51
TRIM3O75382 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM3O75382 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM3O75382 AC142381.4-202ENST00000563973 229 ntBASIC18.23■□□□□ 0.51
TRIM3O75382 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM3O75382 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM3O75382 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM3O75382 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM3O75382 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRIM3O75382 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM3O75382 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM3O75382 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM3O75382 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM3O75382 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM3O75382 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM3O75382 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM3O75382 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRIM3O75382 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM3O75382 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM3O75382 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM3O75382 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIM3O75382 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM3O75382 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM3O75382 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM3O75382 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRIM3O75382 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM3O75382 RPS2P52-201ENST00000469610 820 ntBASIC18.22■□□□□ 0.51
TRIM3O75382 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
TRIM3O75382 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM3O75382 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM3O75382 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM3O75382 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM3O75382 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM3O75382 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM3O75382 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.22■□□□□ 0.51
TRIM3O75382 MTDHP1-201ENST00000605323 784 ntBASIC18.22■□□□□ 0.51
TRIM3O75382 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM3O75382 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM3O75382 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM3O75382 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM3O75382 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM3O75382 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM3O75382 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM3O75382 AL162377.1-201ENST00000618844 1793 ntBASIC18.22■□□□□ 0.51
TRIM3O75382 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIM3O75382 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM3O75382 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM3O75382 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRIM3O75382 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM3O75382 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM3O75382 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM3O75382 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM3O75382 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM3O75382 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
TRIM3O75382 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM3O75382 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM3O75382 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.21■□□□□ 0.51
TRIM3O75382 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.21■□□□□ 0.51
TRIM3O75382 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TRIM3O75382 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.21■□□□□ 0.51
TRIM3O75382 AL359736.2-201ENST00000621992 437 ntBASIC18.21■□□□□ 0.51
TRIM3O75382 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRIM3O75382 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM3O75382 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM3O75382 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM3O75382 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM3O75382 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM3O75382 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM3O75382 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM3O75382 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
TRIM3O75382 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.5
TRIM3O75382 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRIM3O75382 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM3O75382 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM3O75382 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms