Protein–RNA interactions for Protein: O75339

CILP, Cartilage intermediate layer protein 1, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CILPO75339 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CILPO75339 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.82■□□□□ 0.92
CILPO75339 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CILPO75339 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CILPO75339 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CILPO75339 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CILPO75339 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CILPO75339 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CILPO75339 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CILPO75339 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CILPO75339 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CILPO75339 UBE2SP1-201ENST00000450587 669 ntBASIC20.82■□□□□ 0.92
CILPO75339 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.82■□□□□ 0.92
CILPO75339 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CILPO75339 C1QL1P1-201ENST00000568105 661 ntBASIC20.82■□□□□ 0.92
CILPO75339 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.82■□□□□ 0.92
CILPO75339 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.82■□□□□ 0.92
CILPO75339 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.82■□□□□ 0.92
CILPO75339 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CILPO75339 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CILPO75339 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CILPO75339 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.82■□□□□ 0.92
CILPO75339 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CILPO75339 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.82■□□□□ 0.92
CILPO75339 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CILPO75339 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CILPO75339 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CILPO75339 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CILPO75339 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.81■□□□□ 0.92
CILPO75339 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.81■□□□□ 0.92
CILPO75339 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CILPO75339 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.81■□□□□ 0.92
CILPO75339 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CILPO75339 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CILPO75339 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.81■□□□□ 0.92
CILPO75339 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CILPO75339 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.81■□□□□ 0.92
CILPO75339 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CILPO75339 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CILPO75339 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
CILPO75339 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CILPO75339 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
CILPO75339 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
CILPO75339 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.81■□□□□ 0.92
CILPO75339 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.81■□□□□ 0.92
CILPO75339 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CILPO75339 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.81■□□□□ 0.92
CILPO75339 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CILPO75339 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CILPO75339 AL158211.5-201ENST00000623583 2518 ntBASIC20.81■□□□□ 0.92
CILPO75339 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.81■□□□□ 0.92
CILPO75339 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.81■□□□□ 0.92
CILPO75339 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CILPO75339 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CILPO75339 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.8■□□□□ 0.92
CILPO75339 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CILPO75339 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CILPO75339 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CILPO75339 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CILPO75339 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.8■□□□□ 0.92
CILPO75339 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CILPO75339 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.8■□□□□ 0.92
CILPO75339 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
CILPO75339 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CILPO75339 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CILPO75339 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CILPO75339 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CILPO75339 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CILPO75339 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.8■□□□□ 0.92
CILPO75339 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.8■□□□□ 0.92
CILPO75339 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.8■□□□□ 0.92
CILPO75339 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CILPO75339 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CILPO75339 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CILPO75339 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CILPO75339 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.8■□□□□ 0.92
CILPO75339 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.8■□□□□ 0.92
CILPO75339 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CILPO75339 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CILPO75339 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CILPO75339 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CILPO75339 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CILPO75339 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CILPO75339 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CILPO75339 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CILPO75339 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CILPO75339 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CILPO75339 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.79■□□□□ 0.92
CILPO75339 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CILPO75339 RARRES2P10-201ENST00000564312 460 ntBASIC20.79■□□□□ 0.92
CILPO75339 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.79■□□□□ 0.92
CILPO75339 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.79■□□□□ 0.92
CILPO75339 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.79■□□□□ 0.92
CILPO75339 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.79■□□□□ 0.92
CILPO75339 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CILPO75339 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CILPO75339 SLC25A24-204ENST00000569674 2357 ntBASIC20.79■□□□□ 0.92
CILPO75339 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CILPO75339 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CILPO75339 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms