Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CPNE3O75131 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE3O75131 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE3O75131 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.78■□□□□ 0.6
CPNE3O75131 AL355075.4-201ENST00000554988 638 ntBASIC18.78■□□□□ 0.6
CPNE3O75131 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.78■□□□□ 0.6
CPNE3O75131 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.78■□□□□ 0.6
CPNE3O75131 AL353708.3-201ENST00000610272 989 ntBASIC18.78■□□□□ 0.6
CPNE3O75131 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE3O75131 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE3O75131 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE3O75131 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE3O75131 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE3O75131 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CPNE3O75131 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE3O75131 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CPNE3O75131 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE3O75131 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
CPNE3O75131 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE3O75131 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.77■□□□□ 0.6
CPNE3O75131 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE3O75131 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE3O75131 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE3O75131 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE3O75131 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE3O75131 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CPNE3O75131 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE3O75131 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.77■□□□□ 0.6
CPNE3O75131 FAM197Y1-201ENST00000421178 764 ntBASIC18.77■□□□□ 0.6
CPNE3O75131 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE3O75131 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE3O75131 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE3O75131 AP003071.4-201ENST00000562276 1284 ntBASIC18.77■□□□□ 0.6
CPNE3O75131 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.77■□□□□ 0.6
CPNE3O75131 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.77■□□□□ 0.6
CPNE3O75131 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.77■□□□□ 0.6
CPNE3O75131 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CPNE3O75131 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE3O75131 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.77■□□□□ 0.6
CPNE3O75131 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CPNE3O75131 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CPNE3O75131 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.77■□□□□ 0.59
CPNE3O75131 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CPNE3O75131 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE3O75131 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.76■□□□□ 0.59
CPNE3O75131 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE3O75131 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CPNE3O75131 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.76■□□□□ 0.59
CPNE3O75131 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.76■□□□□ 0.59
CPNE3O75131 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.76■□□□□ 0.59
CPNE3O75131 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CPNE3O75131 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE3O75131 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.76■□□□□ 0.59
CPNE3O75131 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE3O75131 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE3O75131 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.76■□□□□ 0.59
CPNE3O75131 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CPNE3O75131 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE3O75131 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.75■□□□□ 0.59
CPNE3O75131 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE3O75131 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CPNE3O75131 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CPNE3O75131 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CPNE3O75131 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE3O75131 AP006587.1-201ENST00000534129 1502 ntBASIC18.75■□□□□ 0.59
CPNE3O75131 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.75■□□□□ 0.59
CPNE3O75131 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CPNE3O75131 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE3O75131 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE3O75131 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE3O75131 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE3O75131 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.75■□□□□ 0.59
CPNE3O75131 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE3O75131 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE3O75131 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE3O75131 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE3O75131 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE3O75131 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE3O75131 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms