Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCN2BO60939 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SCN2BO60939 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.58■□□□□ 0.56
SCN2BO60939 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.58■□□□□ 0.56
SCN2BO60939 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN2BO60939 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN2BO60939 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.57■□□□□ 0.56
SCN2BO60939 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SCN2BO60939 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN2BO60939 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCN2BO60939 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.57■□□□□ 0.56
SCN2BO60939 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN2BO60939 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.57■□□□□ 0.56
SCN2BO60939 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN2BO60939 AF201337.1-201ENST00000520239 748 ntBASIC18.57■□□□□ 0.56
SCN2BO60939 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SCN2BO60939 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SCN2BO60939 MKRN4P-201ENST00000444706 1521 ntBASIC18.57■□□□□ 0.56
SCN2BO60939 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN2BO60939 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN2BO60939 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.57■□□□□ 0.56
SCN2BO60939 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN2BO60939 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN2BO60939 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.57■□□□□ 0.56
SCN2BO60939 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN2BO60939 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCN2BO60939 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCN2BO60939 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN2BO60939 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SCN2BO60939 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SCN2BO60939 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.56■□□□□ 0.56
SCN2BO60939 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.56■□□□□ 0.56
SCN2BO60939 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.56■□□□□ 0.56
SCN2BO60939 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.56■□□□□ 0.56
SCN2BO60939 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.56■□□□□ 0.56
SCN2BO60939 AC105036.2-201ENST00000569468 176 ntBASIC18.56■□□□□ 0.56
SCN2BO60939 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.56■□□□□ 0.56
SCN2BO60939 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.56■□□□□ 0.56
SCN2BO60939 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SCN2BO60939 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.56■□□□□ 0.56
SCN2BO60939 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.56■□□□□ 0.56
SCN2BO60939 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN2BO60939 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN2BO60939 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN2BO60939 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN2BO60939 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN2BO60939 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN2BO60939 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN2BO60939 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN2BO60939 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN2BO60939 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SCN2BO60939 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN2BO60939 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SCN2BO60939 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN2BO60939 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.55■□□□□ 0.56
SCN2BO60939 BX276092.2-201ENST00000417668 665 ntBASIC18.55■□□□□ 0.56
SCN2BO60939 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SCN2BO60939 CROCCP5-201ENST00000436658 830 ntBASIC18.55■□□□□ 0.56
SCN2BO60939 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN2BO60939 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.55■□□□□ 0.56
SCN2BO60939 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.55■□□□□ 0.56
SCN2BO60939 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN2BO60939 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SCN2BO60939 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN2BO60939 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN2BO60939 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SCN2BO60939 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SCN2BO60939 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SCN2BO60939 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN2BO60939 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN2BO60939 TFP1-202ENST00000475455 1573 ntBASIC18.55■□□□□ 0.56
SCN2BO60939 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.54■□□□□ 0.56
SCN2BO60939 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN2BO60939 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN2BO60939 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.54■□□□□ 0.56
SCN2BO60939 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.54■□□□□ 0.56
SCN2BO60939 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.54■□□□□ 0.56
SCN2BO60939 AC073210.2-201ENST00000430369 194 ntBASIC18.54■□□□□ 0.56
SCN2BO60939 AC026185.1-201ENST00000445748 174 ntBASIC18.54■□□□□ 0.56
SCN2BO60939 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.54■□□□□ 0.56
SCN2BO60939 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN2BO60939 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN2BO60939 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms