Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.41■□□□□ 0.86
OPHN1O60890 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
OPHN1O60890 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
OPHN1O60890 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
OPHN1O60890 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
OPHN1O60890 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
OPHN1O60890 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
OPHN1O60890 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
OPHN1O60890 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
OPHN1O60890 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
OPHN1O60890 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
OPHN1O60890 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
OPHN1O60890 KRT16P6-202ENST00000425692 1426 ntBASIC20.4■□□□□ 0.86
OPHN1O60890 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.4■□□□□ 0.86
OPHN1O60890 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.4■□□□□ 0.86
OPHN1O60890 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
OPHN1O60890 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
OPHN1O60890 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.4■□□□□ 0.86
OPHN1O60890 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
OPHN1O60890 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
OPHN1O60890 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
OPHN1O60890 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
OPHN1O60890 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.39■□□□□ 0.86
OPHN1O60890 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
OPHN1O60890 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
OPHN1O60890 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
OPHN1O60890 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
OPHN1O60890 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.39■□□□□ 0.85
OPHN1O60890 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
OPHN1O60890 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
OPHN1O60890 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.39■□□□□ 0.85
OPHN1O60890 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
OPHN1O60890 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.39■□□□□ 0.85
OPHN1O60890 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.39■□□□□ 0.85
OPHN1O60890 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.39■□□□□ 0.85
OPHN1O60890 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.39■□□□□ 0.85
OPHN1O60890 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
OPHN1O60890 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
OPHN1O60890 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
OPHN1O60890 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.38■□□□□ 0.85
OPHN1O60890 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.38■□□□□ 0.85
OPHN1O60890 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
OPHN1O60890 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 HLA-G-202ENST00000376815 851 ntBASIC20.38■□□□□ 0.85
OPHN1O60890 HLA-G-203ENST00000376818 1127 ntBASIC20.38■□□□□ 0.85
OPHN1O60890 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.38■□□□□ 0.85
OPHN1O60890 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.38■□□□□ 0.85
OPHN1O60890 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
OPHN1O60890 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.38■□□□□ 0.85
OPHN1O60890 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.38■□□□□ 0.85
OPHN1O60890 SOX15-203ENST00000570788 1093 ntBASIC20.38■□□□□ 0.85
OPHN1O60890 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.38■□□□□ 0.85
OPHN1O60890 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 AC069544.1-201ENST00000609399 999 ntBASIC20.38■□□□□ 0.85
OPHN1O60890 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.38■□□□□ 0.85
OPHN1O60890 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.38■□□□□ 0.85
OPHN1O60890 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.38■□□□□ 0.85
OPHN1O60890 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
OPHN1O60890 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPHN1O60890 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
OPHN1O60890 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.37■□□□□ 0.85
OPHN1O60890 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPHN1O60890 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPHN1O60890 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPHN1O60890 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPHN1O60890 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPHN1O60890 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPHN1O60890 AC125437.2-201ENST00000625180 2167 ntBASIC20.37■□□□□ 0.85
OPHN1O60890 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
OPHN1O60890 AC023632.3-201ENST00000521633 145 ntBASIC20.37■□□□□ 0.85
OPHN1O60890 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.37■□□□□ 0.85
OPHN1O60890 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.37■□□□□ 0.85
OPHN1O60890 AC010331.1-201ENST00000611423 582 ntBASIC20.37■□□□□ 0.85
OPHN1O60890 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPHN1O60890 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.37■□□□□ 0.85
OPHN1O60890 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.37■□□□□ 0.85
OPHN1O60890 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPHN1O60890 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
OPHN1O60890 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
OPHN1O60890 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
OPHN1O60890 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
OPHN1O60890 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
OPHN1O60890 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
OPHN1O60890 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
OPHN1O60890 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms