Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN4O14493 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN4O14493 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CLDN4O14493 UBE2SP1-201ENST00000450587 669 ntBASIC18.47■□□□□ 0.55
CLDN4O14493 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN4O14493 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CLDN4O14493 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN4O14493 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN4O14493 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN4O14493 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CLDN4O14493 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN4O14493 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLDN4O14493 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.47■□□□□ 0.55
CLDN4O14493 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CLDN4O14493 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN4O14493 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN4O14493 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN4O14493 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN4O14493 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN4O14493 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN4O14493 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN4O14493 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
CLDN4O14493 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN4O14493 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN4O14493 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CLDN4O14493 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.46■□□□□ 0.55
CLDN4O14493 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CLDN4O14493 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CLDN4O14493 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN4O14493 KRT16P5-201ENST00000455284 522 ntBASIC18.46■□□□□ 0.55
CLDN4O14493 AC098590.1-201ENST00000468126 897 ntBASIC18.46■□□□□ 0.55
CLDN4O14493 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.46■□□□□ 0.55
CLDN4O14493 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN4O14493 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN4O14493 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN4O14493 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLDN4O14493 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CLDN4O14493 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN4O14493 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN4O14493 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN4O14493 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CLDN4O14493 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.46■□□□□ 0.54
CLDN4O14493 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN4O14493 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN4O14493 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN4O14493 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN4O14493 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN4O14493 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN4O14493 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN4O14493 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN4O14493 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN4O14493 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CLDN4O14493 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN4O14493 TUBB8P6-201ENST00000436895 1288 ntBASIC18.45■□□□□ 0.54
CLDN4O14493 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN4O14493 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN4O14493 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN4O14493 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.45■□□□□ 0.54
CLDN4O14493 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN4O14493 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CLDN4O14493 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN4O14493 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN4O14493 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.45■□□□□ 0.54
CLDN4O14493 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN4O14493 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN4O14493 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
CLDN4O14493 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN4O14493 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN4O14493 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN4O14493 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN4O14493 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CLDN4O14493 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN4O14493 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN4O14493 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN4O14493 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN4O14493 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN4O14493 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CLDN4O14493 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
CLDN4O14493 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
CLDN4O14493 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.44■□□□□ 0.54
CLDN4O14493 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.44■□□□□ 0.54
CLDN4O14493 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN4O14493 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN4O14493 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
CLDN4O14493 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN4O14493 PCDHAC2-203ENST00000615316 3011 ntBASIC18.44■□□□□ 0.54
CLDN4O14493 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.44■□□□□ 0.54
CLDN4O14493 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN4O14493 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN4O14493 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.44■□□□□ 0.54
CLDN4O14493 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.44■□□□□ 0.54
CLDN4O14493 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.44■□□□□ 0.54
CLDN4O14493 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.44■□□□□ 0.54
CLDN4O14493 AP006294.2-201ENST00000641667 209 ntBASIC18.44■□□□□ 0.54
CLDN4O14493 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN4O14493 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CLDN4O14493 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN4O14493 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CLDN4O14493 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CLDN4O14493 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms