Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SNORA17A-201ENST00000391185 133 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 PPIAP9-201ENST00000403866 498 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 CDY17P-201ENST00000414121 1282 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AC012519.1-201ENST00000424588 610 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AC019185.1-201ENST00000442718 389 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 YWHAEP1-201ENST00000453697 763 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 RN7SL51P-201ENST00000468230 285 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 PPIAP19-201ENST00000486414 492 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AC109464.1-201ENST00000511091 819 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AC074087.1-201ENST00000512059 724 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 SCARNA16.4-201ENST00000516956 187 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AP000859.1-201ENST00000525536 307 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 OR10D4P-201ENST00000525892 951 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AC027544.3-201ENST00000535082 757 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AC135626.1-201ENST00000556983 435 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AP005403.1-201ENST00000579720 229 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 MIR1273E-201ENST00000581165 102 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 PRPF19P1-201ENST00000584766 898 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AC009237.13-201ENST00000603193 276 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 FO393422.1-201ENST00000603908 708 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 RN7SL787P-201ENST00000613000 284 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 SNORA17.5-201ENST00000630429 132 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AC073869.8-201ENST00000641806 335 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 STX3-208ENST00000641815 3236 ntBASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 OR56A4-201ENST00000330728 1209 ntBASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 RNA5SP319-201ENST00000362768 119 ntBASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC007618.1-201ENST00000366455 732 ntBASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 RN7SKP293-201ENST00000411389 296 ntBASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC007738.1-201ENST00000413892 348 ntBASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 NANOGP4-201ENST00000427230 913 ntBASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC016772.1-201ENST00000444170 1261 ntBASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 RPS27AP2-201ENST00000457576 465 ntBASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC245028.2-201ENST00000458673 253 ntBASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 HMGB1P44-201ENST00000508597 572 ntBASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC138938.1-201ENST00000515431 782 ntBASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC078878.1-201ENST00000539832 958 ntBASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC022404.1-201ENST00000555320 273 ntBASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms