Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC126175.1-201ENST00000617041 758 ntBASIC6.07□□□□□ -1.44
PCDHB1Q9Y5F3 AL355493.4-201ENST00000618530 292 ntBASIC6.07□□□□□ -1.44
PCDHB1Q9Y5F3 AC104985.3-201ENST00000623479 597 ntBASIC6.07□□□□□ -1.44
PCDHB1Q9Y5F3 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PCDHB1Q9Y5F3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHB1Q9Y5F3 AL731532.1-201ENST00000623972 4236 ntBASIC6.07□□□□□ -1.44
PCDHB1Q9Y5F3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDHB1Q9Y5F3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHB1Q9Y5F3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDHB1Q9Y5F3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHB1Q9Y5F3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHB1Q9Y5F3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHB1Q9Y5F3 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AC005225.5-201ENST00000623547 2225 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AC024587.1-201ENST00000505925 2157 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 RNA5SP242-201ENST00000364171 118 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 RNU1-59P-201ENST00000364829 162 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 ATP5HP3-201ENST00000396994 486 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 RPL23AP17-201ENST00000401064 499 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AL603865.2-201ENST00000401679 213 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AL096800.1-201ENST00000405326 893 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 HMGB1P13-201ENST00000406019 642 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 RNA5SP156-201ENST00000410250 110 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 RNU4-64P-201ENST00000410795 131 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 RPL5P2-201ENST00000429598 854 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 RPS20P4-201ENST00000461659 355 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 SLC25A51P1-201ENST00000468432 871 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 RN7SL273P-201ENST00000481561 299 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 MTND4LP2-201ENST00000502312 285 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AC119751.5-201ENST00000514077 770 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 Y_RNA.667-201ENST00000516212 107 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 TPM3P3-201ENST00000521343 354 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AC079064.1-201ENST00000528365 362 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 UBTFL10-201ENST00000528532 562 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 MRPS36P5-201ENST00000551909 298 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AC007956.1-201ENST00000555623 542 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AC051619.2-201ENST00000559063 397 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AC090888.2-201ENST00000559765 1144 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 RNU4ATAC-201ENST00000580972 127 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 U1.25-201ENST00000614085 162 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AC006386.1-201ENST00000619436 415 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 U1.31-201ENST00000620022 160 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 AC011330.2-201ENST00000621680 635 ntBASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB1Q9Y5F3 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC008627.1-201ENST00000517511 1704 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC092724.1-201ENST00000624623 3397 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC016583.1-201ENST00000624221 2431 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms