Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 LINC00561-201ENST00000565815 2738 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 RNU6-845P-201ENST00000362578 103 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 Y_RNA.394-201ENST00000383942 103 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 RNU6-767P-201ENST00000384132 107 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 MIR1303-201ENST00000408625 86 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 RN7SKP137-201ENST00000411074 307 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 JKAMPP1-201ENST00000413804 919 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 BOLA3P4-201ENST00000418151 400 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 PIGFP2-201ENST00000421400 651 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 OR4F13P-201ENST00000428478 931 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 TREML3P-201ENST00000457327 501 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 RPS4XP17-201ENST00000479057 754 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 RN7SL332P-201ENST00000482163 254 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 FAM172BP-201ENST00000487497 1089 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AC114967.1-201ENST00000504890 259 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 OR7E87P-201ENST00000532397 929 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AC007424.1-203ENST00000554613 687 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AC090515.3-201ENST00000560431 315 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AC107954.1-201ENST00000565906 727 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 COX6CP4-201ENST00000605798 228 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AC025162.2-201ENST00000619602 560 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 FKBP1AP4-201ENST00000631775 336 ntBASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
PCDHB11Q9Y5F2 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 MTCO1P14-201ENST00000441695 1559 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 OR4A15-201ENST00000314706 1035 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 Y_RNA.25-201ENST00000362528 102 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 ZNF37CP-201ENST00000406795 241 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AL603766.1-201ENST00000407763 664 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 Y_RNA.608-201ENST00000410647 95 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms