Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 HSPA8P15-201ENST00000401676 786 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 AC007064.3-201ENST00000422608 359 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 AL590399.2-201ENST00000427536 309 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 HSPA8P18-201ENST00000439846 1928 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 AC090114.3-201ENST00000479267 829 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 COL6A4P2-205ENST00000509855 506 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 EIF3KP3-201ENST00000514461 639 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 RN7SKP67-201ENST00000515905 235 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 AC013701.1-201ENST00000522657 465 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 OR8G3P-201ENST00000533406 921 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 AC092490.3-201ENST00000545370 572 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 AC009237.13-201ENST00000603193 276 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 AC133644.2-201ENST00000608142 540 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 OR7M1P-201ENST00000608946 533 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 Mico1.1-201ENST00000611698 204 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 AP002799.1-201ENST00000623552 423 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 AC103798.2-201ENST00000624292 632 ntBASIC5.61□□□□□ -1.51
YIPF1Q9Y548 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.61□□□□□ -1.51
YIPF1Q9Y548 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 OFD1P17-201ENST00000437639 3018 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AC131971.1-201ENST00000332881 1482 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 OR51C1P-202ENST00000641159 1444 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 RNA5SP514-201ENST00000363717 111 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 MIR550A3-201ENST00000390735 95 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AC211486.3-201ENST00000412694 621 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AL590762.4-201ENST00000425885 253 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 RPL7P40-201ENST00000481703 745 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AC058823.1-201ENST00000485315 474 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 RN7SL97P-201ENST00000486780 299 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 RWDD4P1-201ENST00000488019 565 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 ATG10-AS1-201ENST00000504846 648 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AC110775.1-201ENST00000513721 462 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AP000676.2-201ENST00000529711 301 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AL731537.2-201ENST00000561565 951 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AC010547.7-201ENST00000570323 333 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 MIR4700-201ENST00000578311 74 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 MIR4646-201ENST00000580775 63 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AC008833.1-201ENST00000611633 691 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AL352984.2-202ENST00000613699 155 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AC091948.2-201ENST00000636510 279 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms