Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
IFT52Q9Y366 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
IFT52Q9Y366 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
IFT52Q9Y366 OR7E25P-201ENST00000344844 931 ntBASIC5.09□□□□□ -1.59
IFT52Q9Y366 RNA5SP394-201ENST00000364216 119 ntBASIC5.09□□□□□ -1.59
IFT52Q9Y366 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 PPIAP9-201ENST00000403866 498 ntBASIC5.09□□□□□ -1.59
IFT52Q9Y366 MIR1271-201ENST00000408537 86 ntBASIC5.09□□□□□ -1.59
IFT52Q9Y366 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.09□□□□□ -1.59
IFT52Q9Y366 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
IFT52Q9Y366 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 RNA5SP473-201ENST00000516402 125 ntBASIC5.09□□□□□ -1.59
IFT52Q9Y366 HMGB1P19-201ENST00000517578 577 ntBASIC5.09□□□□□ -1.59
IFT52Q9Y366 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 AC024405.1-201ENST00000532521 1042 ntBASIC5.09□□□□□ -1.59
IFT52Q9Y366 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 AC129915.3-201ENST00000634128 948 ntBASIC5.09□□□□□ -1.59
IFT52Q9Y366 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.09□□□□□ -1.59
IFT52Q9Y366 AC073869.8-201ENST00000641806 335 ntBASIC5.09□□□□□ -1.59
IFT52Q9Y366 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
IFT52Q9Y366 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
IFT52Q9Y366 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
IFT52Q9Y366 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.09□□□□□ -1.6
IFT52Q9Y366 AL606537.1-201ENST00000607258 2011 ntBASIC5.09□□□□□ -1.6
IFT52Q9Y366 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
IFT52Q9Y366 AC100757.1-201ENST00000616872 1835 ntBASIC5.09□□□□□ -1.6
IFT52Q9Y366 AC008079.2-201ENST00000623543 20396 ntBASIC5.09□□□□□ -1.6
IFT52Q9Y366 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.09□□□□□ -1.6
IFT52Q9Y366 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
IFT52Q9Y366 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
IFT52Q9Y366 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
IFT52Q9Y366 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
IFT52Q9Y366 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 OR52B3P-201ENST00000314715 928 ntBASIC5.08□□□□□ -1.6
IFT52Q9Y366 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
IFT52Q9Y366 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
IFT52Q9Y366 SNORA48.4-201ENST00000391089 134 ntBASIC5.08□□□□□ -1.6
IFT52Q9Y366 RNA5SP241-201ENST00000391326 114 ntBASIC5.08□□□□□ -1.6
IFT52Q9Y366 VN1R12P-201ENST00000403778 876 ntBASIC5.08□□□□□ -1.6
IFT52Q9Y366 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 RPSAP35-201ENST00000413753 818 ntBASIC5.08□□□□□ -1.6
IFT52Q9Y366 MTCO1P51-201ENST00000427672 1060 ntBASIC5.08□□□□□ -1.6
IFT52Q9Y366 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 AC016772.1-201ENST00000444170 1261 ntBASIC5.08□□□□□ -1.6
IFT52Q9Y366 AC002553.2-201ENST00000453217 340 ntBASIC5.08□□□□□ -1.6
IFT52Q9Y366 AC107015.1-201ENST00000466902 747 ntBASIC5.08□□□□□ -1.6
IFT52Q9Y366 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.08□□□□□ -1.6
IFT52Q9Y366 UBFD1P1-201ENST00000473259 814 ntBASIC5.08□□□□□ -1.6
IFT52Q9Y366 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 AC098976.1-201ENST00000513014 541 ntBASIC5.08□□□□□ -1.6
IFT52Q9Y366 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 RN7SL290P-201ENST00000578661 300 ntBASIC5.08□□□□□ -1.6
IFT52Q9Y366 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 AC079315.1-201ENST00000602952 623 ntBASIC5.08□□□□□ -1.6
IFT52Q9Y366 SNORA35B-201ENST00000607417 129 ntBASIC5.08□□□□□ -1.6
IFT52Q9Y366 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
IFT52Q9Y366 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
IFT52Q9Y366 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
IFT52Q9Y366 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
IFT52Q9Y366 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
IFT52Q9Y366 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
IFT52Q9Y366 HSPA8P18-201ENST00000439846 1928 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms