Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 CYCSP24-201ENST00000445119 316 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AC105399.1-202ENST00000447303 205 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 EIF1P7-201ENST00000487533 337 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AC111000.5-201ENST00000506559 1178 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 SCARNA16.4-201ENST00000516956 187 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AC027544.3-201ENST00000535082 757 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 ADAM3B-201ENST00000569937 840 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AC020978.7-201ENST00000575953 1187 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AL589674.2-201ENST00000604304 337 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AC022106.2-201ENST00000620114 757 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
TRAPPC4Q9Y296 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.9□□□□□ -1.62
TRAPPC4Q9Y296 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRAPPC4Q9Y296 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.9□□□□□ -1.62
TRAPPC4Q9Y296 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TRAPPC4Q9Y296 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRAPPC4Q9Y296 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.9□□□□□ -1.62
TRAPPC4Q9Y296 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.9□□□□□ -1.62
TRAPPC4Q9Y296 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 RNA5SP435-201ENST00000364044 108 ntBASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 PCNPP4-201ENST00000414817 517 ntBASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 AC012519.1-201ENST00000424588 610 ntBASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 AC017019.1-201ENST00000426129 261 ntBASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 AL390119.1-201ENST00000440329 312 ntBASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 RPSAP39-201ENST00000467439 883 ntBASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 AC109464.1-201ENST00000511091 819 ntBASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 AP005403.1-201ENST00000579720 229 ntBASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 AC108738.1-201ENST00000603703 237 ntBASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 AL512356.3-201ENST00000623005 461 ntBASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 HCFC2P1-201ENST00000392864 1592 ntBASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TRAPPC4Q9Y296 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 PROS2P-201ENST00000474651 1951 ntBASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 AC007738.1-201ENST00000413892 348 ntBASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 SMC4P1-201ENST00000414479 527 ntBASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 OR6C64P-201ENST00000419708 825 ntBASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 AL121776.1-201ENST00000429337 372 ntBASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms