Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 OR10D4P-201ENST00000525892 951 ntBASIC4.94□□□□□ -1.62
VAPAQ9P0L0 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 BLZF2P-201ENST00000553776 1130 ntBASIC4.94□□□□□ -1.62
VAPAQ9P0L0 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 AC007066.2-202ENST00000566531 914 ntBASIC4.94□□□□□ -1.62
VAPAQ9P0L0 RBM22P1-201ENST00000578589 1214 ntBASIC4.94□□□□□ -1.62
VAPAQ9P0L0 AC027243.2-201ENST00000602530 724 ntBASIC4.94□□□□□ -1.62
VAPAQ9P0L0 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 AC009779.8-202ENST00000607990 932 ntBASIC4.94□□□□□ -1.62
VAPAQ9P0L0 MIR6780B-201ENST00000610307 79 ntBASIC4.94□□□□□ -1.62
VAPAQ9P0L0 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 AC104260.2-201ENST00000623551 3497 ntBASIC4.94□□□□□ -1.62
VAPAQ9P0L0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 AL672167.1-204ENST00000641875 3017 ntBASIC4.94□□□□□ -1.62
VAPAQ9P0L0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VAPAQ9P0L0 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AC025574.1-201ENST00000554784 1653 ntBASIC4.93□□□□□ -1.62
VAPAQ9P0L0 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AC017079.1-201ENST00000333650 415 ntBASIC4.93□□□□□ -1.62
VAPAQ9P0L0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 RNU1-74P-201ENST00000384108 171 ntBASIC4.93□□□□□ -1.62
VAPAQ9P0L0 RNA5SP122-201ENST00000384457 108 ntBASIC4.93□□□□□ -1.62
VAPAQ9P0L0 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 SLC20A1P1-201ENST00000413906 956 ntBASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AC013268.2-201ENST00000420753 337 ntBASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 TNPO1P1-201ENST00000423641 1138 ntBASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AC002504.1-201ENST00000438281 691 ntBASIC4.93□□□□□ -1.62
VAPAQ9P0L0 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AC091544.1-201ENST00000484702 348 ntBASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AC069304.1-201ENST00000491593 704 ntBASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AL671862.1-201ENST00000515851 349 ntBASIC4.93□□□□□ -1.62
VAPAQ9P0L0 RNU6-513P-201ENST00000516104 104 ntBASIC4.93□□□□□ -1.62
VAPAQ9P0L0 RNA5SP373-201ENST00000517271 95 ntBASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AC010547.6-201ENST00000571789 193 ntBASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AC018695.5-201ENST00000605872 315 ntBASIC4.93□□□□□ -1.62
VAPAQ9P0L0 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 OR8G7P-201ENST00000616658 848 ntBASIC4.93□□□□□ -1.62
VAPAQ9P0L0 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VAPAQ9P0L0 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AC000374.1-201ENST00000434698 1745 ntBASIC4.92□□□□□ -1.62
VAPAQ9P0L0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms