Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 AC114947.2-201ENST00000565748 2125 ntBASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTNNBIP1Q9NSA3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTNNBIP1Q9NSA3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.34□□□□□ -1.72
CTNNBIP1Q9NSA3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CTNNBIP1Q9NSA3 AC107027.3-201ENST00000565095 3473 ntBASIC4.34□□□□□ -1.72
CTNNBIP1Q9NSA3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CTNNBIP1Q9NSA3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AC027279.1-201ENST00000568885 4284 ntBASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 SUGT1P2-201ENST00000379452 992 ntBASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 RPS3AP2-201ENST00000407190 754 ntBASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AC007738.1-201ENST00000413892 348 ntBASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 OR6D1P-201ENST00000436165 939 ntBASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 GAPDHP58-201ENST00000438477 1006 ntBASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AL512637.1-201ENST00000439523 1231 ntBASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 EEF1B2P3-201ENST00000447718 678 ntBASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AL672138.1-201ENST00000450604 1015 ntBASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AC093827.1-201ENST00000480094 861 ntBASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AC025458.1-201ENST00000506046 166 ntBASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 OR8A2P-201ENST00000528631 952 ntBASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AP000648.2-201ENST00000624182 404 ntBASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AC008691.1-209ENST00000642094 814 ntBASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNBIP1Q9NSA3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 AC023421.1-201ENST00000590535 1785 ntBASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 SRRM1P3-201ENST00000426911 2678 ntBASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 AC000123.3-201ENST00000624029 4975 ntBASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 MIR375-201ENST00000362103 64 ntBASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 RNU4-2-201ENST00000365668 141 ntBASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 HMGB3P7-201ENST00000400214 611 ntBASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 CTSL3P-202ENST00000412179 788 ntBASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 NPM1P33-201ENST00000438918 872 ntBASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 MTND6P18-201ENST00000439477 513 ntBASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 GTF3AP5-201ENST00000442645 697 ntBASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 LRRC37A14P-201ENST00000452297 462 ntBASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 VDAC2P4-201ENST00000452925 711 ntBASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 RPS23P6-201ENST00000466136 431 ntBASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 CBX1P5-201ENST00000475330 559 ntBASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 MRPS21P7-201ENST00000566937 238 ntBASIC4.32□□□□□ -1.72
CTNNBIP1Q9NSA3 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms