Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 PYM1-204ENST00000454792 884 ntTSL 2 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 RPSAP24-201ENST00000461543 873 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 RN7SL213P-201ENST00000463482 317 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 AL121769.1-201ENST00000469473 401 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 AC072039.1-201ENST00000477611 581 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 AC135999.1-201ENST00000478962 479 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 TECRP2-201ENST00000503270 928 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 AC017007.1-201ENST00000511960 415 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 RN7SKP67-201ENST00000515905 235 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 RNU6-1334P-201ENST00000516032 105 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 RN7SKP11-201ENST00000517018 287 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 AP001646.1-201ENST00000527936 915 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 AC073916.1-201ENST00000545095 130 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 LINC00556-201ENST00000569603 412 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 IMMP1LP1-201ENST00000605170 488 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 AC008945.2-201ENST00000606056 604 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 AL158211.4-201ENST00000606988 584 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 AP005137.2-201ENST00000609238 400 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 AC090970.3-201ENST00000612566 866 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 AC009120.7-201ENST00000623452 780 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 AL162377.2-201ENST00000624532 337 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 AC025048.6-202ENST00000627667 438 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 AL121936.2-201ENST00000641935 662 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 KYNUP2-201ENST00000582280 1329 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 AC010168.2-201ENST00000562691 5428 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SSU72Q9NP77 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SSU72Q9NP77 FUNDC2P3-201ENST00000334716 533 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 SNORA38B-201ENST00000363524 131 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 SNORA70.5-201ENST00000365519 135 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 SNORA35-201ENST00000386104 128 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 RPS3AP5-201ENST00000389400 821 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 PIGPP2-201ENST00000411569 458 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 MTATP6P27-201ENST00000416987 621 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 UBTFL3-201ENST00000418934 1024 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 AC009480.2-201ENST00000422916 432 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 MTND1P28-201ENST00000435623 950 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 AC234064.1-201ENST00000436312 247 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 UBTFL6-201ENST00000477929 1024 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 AC090071.1-201ENST00000507713 644 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 PHBP2-201ENST00000532859 806 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 AC005832.3-201ENST00000537929 631 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 ZNF519P2-201ENST00000557032 169 ntBASIC6.65□□□□□ -1.34
SSU72Q9NP77 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC6.65□□□□□ -1.34
SSU72Q9NP77 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms