Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 SNORA64.3-201ENST00000365647 134 ntBASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 RNU1-74P-201ENST00000384108 171 ntBASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 RN7SKP146-201ENST00000410242 334 ntBASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AL022324.2-201ENST00000434827 780 ntBASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 OR6C72P-201ENST00000451403 892 ntBASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 SEPT7P6-201ENST00000469999 1143 ntBASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AC058823.1-201ENST00000485315 474 ntBASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AC006427.1-201ENST00000514359 712 ntBASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AC027026.1-201ENST00000532323 742 ntBASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 DPPA2P4-201ENST00000563717 878 ntBASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AC012368.3-201ENST00000604190 219 ntBASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 IMMP1LP1-201ENST00000605170 488 ntBASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 FAM27E4-201ENST00000605259 342 ntBASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AC211486.4-201ENST00000621495 113 ntBASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AL357140.4-201ENST00000636827 412 ntBASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AC073869.7-201ENST00000640874 297 ntBASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VIPAS39Q9H9C1 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 RNA5SP131-201ENST00000365452 119 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 SNORA51.9-201ENST00000384295 124 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 MIR551B-201ENST00000384984 96 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 MTND4LP21-201ENST00000415303 295 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 E2F6P2-201ENST00000420708 748 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AL358176.3-201ENST00000420757 454 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 CKS1BP6-201ENST00000424932 240 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AL161722.2-201ENST00000434731 981 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 PCNPP2-201ENST00000441651 455 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 RN7SL193P-201ENST00000491708 276 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 EIF4E2P2-201ENST00000492033 736 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AC113191.1-201ENST00000517759 403 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 MRPS16P1-201ENST00000523462 412 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AP003396.4-201ENST00000527574 265 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AC116553.2-201ENST00000564203 463 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AC004232.2-201ENST00000574245 821 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AC022001.1-201ENST00000605193 268 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 AL353796.1-201ENST00000561542 3241 ntBASIC5.35□□□□□ -1.55
VIPAS39Q9H9C1 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms