Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 CASC19-248ENST00000641674 1356 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 RNA5SP308-201ENST00000362532 115 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 RNU1-5P-201ENST00000362684 144 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 RNU1-87P-201ENST00000363727 170 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 RNU6-1215P-201ENST00000384441 102 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC026310.1-201ENST00000396004 378 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 RN7SKP166-201ENST00000410812 305 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 RAC1P8-201ENST00000427086 527 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 RPL34P27-201ENST00000428810 349 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 MOB1AP1-201ENST00000430903 535 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 NEK4P1-201ENST00000433383 879 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 H3F3BP1-201ENST00000440551 403 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AL353572.1-201ENST00000442490 417 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 TVP23CP1-201ENST00000450317 639 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 RPL7P16-201ENST00000479738 738 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC090058.1-201ENST00000498788 435 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC108475.1-201ENST00000507880 950 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 PCNPP1-201ENST00000552501 511 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC023310.2-201ENST00000553844 547 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC021749.1-201ENST00000604322 607 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC091932.2-201ENST00000623014 291 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 RBM12B-AS1-201ENST00000623283 653 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AC009120.7-201ENST00000623452 780 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 AF246928.1-201ENST00000623768 87 ntBASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.69□□□□□ -1.34
FOXP3Q9BZS1 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 CR381670.1-201ENST00000624291 1693 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 SNORA64.3-201ENST00000365647 134 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 UBBP1-201ENST00000392399 473 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AL590084.2-201ENST00000401481 382 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 RN7SKP273-201ENST00000411392 314 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 NME1P1-201ENST00000420914 382 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 GAPDHP19-201ENST00000431768 1005 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AC245291.3-201ENST00000443400 292 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 SNRPBP1-201ENST00000443634 282 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 PFN1P11-201ENST00000445829 389 ntBASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXP3Q9BZS1 AL022237.1-201ENST00000446663 358 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms