Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 AC022417.1-201ENST00000624768 1303 ntBASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 U3.2-201ENST00000362981 210 ntBASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 MIR105-2-201ENST00000385083 81 ntBASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 U3.25-201ENST00000391209 220 ntBASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 RPL21P67-201ENST00000402896 478 ntBASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 RN7SKP286-201ENST00000410894 299 ntBASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 OR2AT2P-201ENST00000413438 905 ntBASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 BX842559.2-201ENST00000451418 605 ntBASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 AC079168.1-201ENST00000458741 345 ntBASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 RN7SL547P-201ENST00000490793 290 ntBASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 AC112191.2-201ENST00000522428 333 ntBASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 AC127381.1-201ENST00000555979 939 ntBASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 RN7SL708P-201ENST00000580952 299 ntBASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 AP005131.7-201ENST00000610087 611 ntBASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 THAP12P5-201ENST00000405864 2275 ntBASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RSPO3Q9BXY4 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 AC100778.3-201ENST00000580060 1750 ntBASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 AC235565.1-201ENST00000456962 1325 ntBASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 RNA5SP242-201ENST00000364171 118 ntBASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 RNU1-74P-201ENST00000384108 171 ntBASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 GTF3AP1-201ENST00000416942 1004 ntBASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 CYCSP12-201ENST00000437729 300 ntBASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 RPSAP39-201ENST00000467439 883 ntBASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 AC005412.2-201ENST00000492004 341 ntBASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 RN7SKP99-201ENST00000517028 307 ntBASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 AC005252.1-201ENST00000604518 1063 ntBASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 AC009597.2-201ENST00000604659 592 ntBASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RSPO3Q9BXY4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 AL731532.2-201ENST00000623542 1953 ntBASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 OR9K1P-201ENST00000326513 941 ntBASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 RNA5SP183-201ENST00000362452 119 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms