Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 CELF2-202ENST00000399850 7085 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 SNX13-203ENST00000428135 6357 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 RNU6-1255P-201ENST00000363434 112 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 RNU6-297P-201ENST00000384636 107 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 RN7SKP56-201ENST00000410513 331 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC233981.1-201ENST00000423224 461 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC127526.2-201ENST00000426436 775 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 USP9YP14-201ENST00000430663 563 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 Z74696.2-201ENST00000436514 498 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 GTF3AP5-201ENST00000442645 697 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 RPL23AP6-201ENST00000446637 472 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 RPS23P9-201ENST00000448848 438 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL389915.2-201ENST00000454576 441 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 RANP1-206ENST00000455094 651 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL122020.1-201ENST00000472287 459 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 RPL31P61-201ENST00000496160 376 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL138976.2-201ENST00000563989 694 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL391001.1-201ENST00000602747 715 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC064872.1-201ENST00000604823 1072 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC087783.2-201ENST00000605070 562 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 DCLK1-201ENST00000255448 5703 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 FRMPD1-203ENST00000539465 5465 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC109315.1-201ENST00000584143 1347 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 XPR1-202ENST00000367590 8474 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 DDX46-202ENST00000452510 5689 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 GCNT7-202ENST00000617620 1355 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 RPRD2-202ENST00000369068 4612 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 CARD8-203ENST00000447740 5210 ntAPPRIS P3 TSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 RNA5SP183-201ENST00000362452 119 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL353625.1-202ENST00000366273 571 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 RNU6-141P-201ENST00000410499 105 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 QRSL1P2-201ENST00000418582 964 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC002542.1-201ENST00000440683 193 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC009263.1-201ENST00000441193 1239 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 HMGN1P10-201ENST00000474557 553 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 RNU6-751P-201ENST00000516382 101 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 RNU6-521P-201ENST00000516663 105 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 E2F3-202ENST00000535432 4425 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC006530.1-201ENST00000555980 571 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms