Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 NENFP3-201ENST00000503735 313 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC112484.3-201ENST00000505910 329 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 IMPA1P1-201ENST00000510718 842 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 EIF3KP3-201ENST00000514461 639 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 RNA5SP303-201ENST00000516192 130 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC022360.1-201ENST00000521058 340 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC100784.1-201ENST00000522790 310 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC084121.1-201ENST00000533882 835 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 HSPE1P2-201ENST00000554777 306 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AL008729.2-201ENST00000606393 473 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AL353600.1-201ENST00000608148 251 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AL365181.4-201ENST00000609800 547 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC007204.1-201ENST00000621794 555 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC022919.1-201ENST00000624979 626 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 AC003973.3-201ENST00000624863 2822 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.97□□□□□ -1.77
AP1S3Q96PC3 KARSP1-201ENST00000451871 1752 ntBASIC3.97□□□□□ -1.77
AP1S3Q96PC3 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.96□□□□□ -1.77
AP1S3Q96PC3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
AP1S3Q96PC3 NAMPTP1-201ENST00000440465 2514 ntBASIC3.96□□□□□ -1.77
AP1S3Q96PC3 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
AP1S3Q96PC3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
AP1S3Q96PC3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.77
AP1S3Q96PC3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 OR51H2P-202ENST00000641424 3046 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 RNFT1P3-201ENST00000340898 1052 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC013442.1-201ENST00000397347 228 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 RPS24P12-201ENST00000402084 394 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 Z82198.3-201ENST00000421145 199 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AL034379.1-201ENST00000423216 253 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 VN1R110P-201ENST00000438988 971 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC064862.5-201ENST00000440618 334 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 RPL12P49-201ENST00000441100 121 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 NPM1P39-201ENST00000449818 867 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 CYCSP34-201ENST00000458172 304 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 SCARNA20.4-201ENST00000516969 131 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 RN7SKP35-201ENST00000517210 151 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC092709.1-201ENST00000521355 1045 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 IGLV3-30-201ENST00000524362 298 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC011270.1-201ENST00000558606 583 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC040958.1-201ENST00000561102 201 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 TEX41-218ENST00000596540 882 ntTSL 5 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 XIST-210ENST00000602863 775 ntTSL 3 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC009237.13-201ENST00000603193 276 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC096553.1-201ENST00000605169 829 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC097505.1-201ENST00000610199 565 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 uc_338.29-201ENST00000615099 168 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 AC073869.8-201ENST00000641806 335 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 TET1P1-201ENST00000426627 2301 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms