Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 RNU1-19P-201ENST00000363306 165 ntBASIC5.46□□□□□ -1.54
C9orf72Q96LT7 RN7SKP6-201ENST00000364795 319 ntBASIC5.46□□□□□ -1.54
C9orf72Q96LT7 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 AL136455.1-201ENST00000441083 1240 ntBASIC5.46□□□□□ -1.54
C9orf72Q96LT7 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 AL035090.1-201ENST00000454835 332 ntBASIC5.46□□□□□ -1.54
C9orf72Q96LT7 AC110749.1-201ENST00000462007 357 ntBASIC5.46□□□□□ -1.54
C9orf72Q96LT7 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 BX510359.5-201ENST00000515651 304 ntBASIC5.46□□□□□ -1.54
C9orf72Q96LT7 RNU6-1334P-201ENST00000516032 105 ntBASIC5.46□□□□□ -1.54
C9orf72Q96LT7 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 BX323046.1-201ENST00000610145 535 ntBASIC5.46□□□□□ -1.54
C9orf72Q96LT7 Z95327.3-201ENST00000610385 572 ntBASIC5.46□□□□□ -1.54
C9orf72Q96LT7 AC007204.2-201ENST00000615022 616 ntBASIC5.46□□□□□ -1.54
C9orf72Q96LT7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 AC132825.8-201ENST00000640783 297 ntBASIC5.46□□□□□ -1.54
C9orf72Q96LT7 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 MRRFP1-201ENST00000435941 1675 ntBASIC5.46□□□□□ -1.54
C9orf72Q96LT7 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
C9orf72Q96LT7 SMG1P7-201ENST00000565246 2704 ntBASIC5.46□□□□□ -1.54
C9orf72Q96LT7 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 LINC01963-201ENST00000562038 3148 ntBASIC5.45□□□□□ -1.54
C9orf72Q96LT7 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 AC124944.2-201ENST00000429866 1242 ntBASIC5.45□□□□□ -1.54
C9orf72Q96LT7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 GAPDHP14-201ENST00000450472 937 ntBASIC5.45□□□□□ -1.54
C9orf72Q96LT7 AC007386.1-201ENST00000455212 582 ntBASIC5.45□□□□□ -1.54
C9orf72Q96LT7 RPL35AP19-201ENST00000469425 329 ntBASIC5.45□□□□□ -1.54
C9orf72Q96LT7 COX6B1P2-201ENST00000489624 230 ntBASIC5.45□□□□□ -1.54
C9orf72Q96LT7 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 MTND6P2-201ENST00000512226 524 ntBASIC5.45□□□□□ -1.54
C9orf72Q96LT7 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.45□□□□□ -1.54
C9orf72Q96LT7 AC022884.2-201ENST00000578535 580 ntBASIC5.45□□□□□ -1.54
C9orf72Q96LT7 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 PPATP2-201ENST00000605635 508 ntBASIC5.45□□□□□ -1.54
C9orf72Q96LT7 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.45□□□□□ -1.54
C9orf72Q96LT7 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.45□□□□□ -1.54
C9orf72Q96LT7 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.45□□□□□ -1.54
C9orf72Q96LT7 AC138965.3-201ENST00000623875 498 ntBASIC5.45□□□□□ -1.54
C9orf72Q96LT7 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 AC093849.1-201ENST00000563631 2209 ntBASIC5.45□□□□□ -1.54
C9orf72Q96LT7 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.45□□□□□ -1.54
C9orf72Q96LT7 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
C9orf72Q96LT7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
C9orf72Q96LT7 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
C9orf72Q96LT7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
C9orf72Q96LT7 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
C9orf72Q96LT7 MIR1178-201ENST00000408396 91 ntBASIC5.44□□□□□ -1.54
C9orf72Q96LT7 RN7SKP59-201ENST00000410520 314 ntBASIC5.44□□□□□ -1.54
C9orf72Q96LT7 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.44□□□□□ -1.54
C9orf72Q96LT7 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
C9orf72Q96LT7 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.44□□□□□ -1.54
C9orf72Q96LT7 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.44□□□□□ -1.54
C9orf72Q96LT7 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.44□□□□□ -1.54
C9orf72Q96LT7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.44□□□□□ -1.54
C9orf72Q96LT7 NOP56P2-201ENST00000447491 769 ntBASIC5.44□□□□□ -1.54
C9orf72Q96LT7 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.44□□□□□ -1.54
C9orf72Q96LT7 AC026348.1-201ENST00000462549 1053 ntBASIC5.44□□□□□ -1.54
C9orf72Q96LT7 AC100832.1-201ENST00000471945 383 ntBASIC5.44□□□□□ -1.54
C9orf72Q96LT7 RPL7P41-201ENST00000485823 957 ntBASIC5.44□□□□□ -1.54
C9orf72Q96LT7 RPS24P16-201ENST00000497294 392 ntBASIC5.44□□□□□ -1.54
C9orf72Q96LT7 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.44□□□□□ -1.54
C9orf72Q96LT7 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.44□□□□□ -1.54
C9orf72Q96LT7 AC027026.1-201ENST00000532323 742 ntBASIC5.44□□□□□ -1.54
C9orf72Q96LT7 AP004607.2-201ENST00000533949 322 ntBASIC5.44□□□□□ -1.54
C9orf72Q96LT7 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
C9orf72Q96LT7 RN7SL356P-201ENST00000582228 248 ntBASIC5.44□□□□□ -1.54
C9orf72Q96LT7 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms