Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
LRCH3Q96II8 MTND5P27-201ENST00000428871 1720 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 AC110998.1-201ENST00000519029 2053 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LRCH3Q96II8 OR5M2P-202ENST00000641241 4242 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LRCH3Q96II8 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 TAB3P1-202ENST00000452645 1634 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 OR4A15-201ENST00000314706 1035 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 STAG3L4-201ENST00000352103 530 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 Y_RNA.47-201ENST00000362697 108 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 RNA5SP232-201ENST00000364144 119 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LRCH3Q96II8 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LRCH3Q96II8 Y_RNA.608-201ENST00000410647 95 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LRCH3Q96II8 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 MEMO1P4-201ENST00000453590 386 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 AC022634.1-201ENST00000520765 532 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 AC010547.7-201ENST00000570323 333 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LRCH3Q96II8 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 PRR13P4-201ENST00000577786 421 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 MIR3157-201ENST00000578688 85 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 MIR5682-201ENST00000584864 76 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 U1.22-201ENST00000605806 164 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 AC093913.1-201ENST00000614178 329 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 AC233280.20-201ENST00000637412 416 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LRCH3Q96II8 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LRCH3Q96II8 AC217777.1-201ENST00000570034 1471 ntBASIC8.23□□□□□ -1.09
LRCH3Q96II8 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
LRCH3Q96II8 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LRCH3Q96II8 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
LRCH3Q96II8 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LRCH3Q96II8 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LRCH3Q96II8 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LRCH3Q96II8 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LRCH3Q96II8 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 IPO7P2-201ENST00000451446 1750 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
LRCH3Q96II8 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LRCH3Q96II8 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LRCH3Q96II8 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LRCH3Q96II8 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
LRCH3Q96II8 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 Y_RNA.28-201ENST00000362554 111 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 RNU6-282P-201ENST00000365357 103 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 RNU1-122P-201ENST00000365538 156 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LRCH3Q96II8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LRCH3Q96II8 RNU6-1297P-201ENST00000384415 104 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 SNORD94-201ENST00000386037 137 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 AL592114.1-201ENST00000403842 483 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 MIR1275-201ENST00000408770 80 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 RPS26P13-201ENST00000419030 330 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 AL139184.1-202ENST00000422303 222 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 OR5W1P-201ENST00000423705 938 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 PLA2G12AP2-201ENST00000424744 264 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 AC005033.1-201ENST00000428904 813 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 RPS18P1-201ENST00000447840 458 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 AC239798.3-201ENST00000454459 408 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 AC234782.3-201ENST00000461229 433 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 AC114324.2-202ENST00000503812 134 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 RNU6-559P-201ENST00000516151 98 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 RNU6-445P-201ENST00000516949 107 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms