Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC092653.1-201ENST00000608509 531 ntBASIC8.5□□□□□ -1.05
TOPBP1Q92547 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC8.5□□□□□ -1.05
TOPBP1Q92547 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC8.5□□□□□ -1.05
TOPBP1Q92547 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
TOPBP1Q92547 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TOPBP1Q92547 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC8.5□□□□□ -1.05
TOPBP1Q92547 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TOPBP1Q92547 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.5□□□□□ -1.05
TOPBP1Q92547 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
TOPBP1Q92547 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC8.5□□□□□ -1.05
TOPBP1Q92547 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TOPBP1Q92547 OFD1P8Y-201ENST00000449148 1433 ntBASIC8.5□□□□□ -1.05
TOPBP1Q92547 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
TOPBP1Q92547 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
TOPBP1Q92547 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
TOPBP1Q92547 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TOPBP1Q92547 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TOPBP1Q92547 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TOPBP1Q92547 U3.28-201ENST00000391249 210 ntBASIC8.49□□□□□ -1.05
TOPBP1Q92547 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TOPBP1Q92547 FABP7P1-201ENST00000424004 391 ntBASIC8.49□□□□□ -1.05
TOPBP1Q92547 OR2B7P-201ENST00000429302 934 ntBASIC8.49□□□□□ -1.05
TOPBP1Q92547 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TOPBP1Q92547 AC122718.1-201ENST00000439448 744 ntBASIC8.49□□□□□ -1.05
TOPBP1Q92547 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC8.49□□□□□ -1.05
TOPBP1Q92547 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC8.49□□□□□ -1.05
TOPBP1Q92547 RPL23AP56-201ENST00000460778 453 ntBASIC8.49□□□□□ -1.05
TOPBP1Q92547 FAM133DP-201ENST00000464802 691 ntBASIC8.49□□□□□ -1.05
TOPBP1Q92547 SLC25A15P5-201ENST00000508033 253 ntBASIC8.49□□□□□ -1.05
TOPBP1Q92547 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC8.49□□□□□ -1.05
TOPBP1Q92547 AC069366.1-201ENST00000583159 838 ntBASIC8.49□□□□□ -1.05
TOPBP1Q92547 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TOPBP1Q92547 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
TOPBP1Q92547 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC8.49□□□□□ -1.05
TOPBP1Q92547 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
TOPBP1Q92547 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
TOPBP1Q92547 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
TOPBP1Q92547 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TOPBP1Q92547 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TOPBP1Q92547 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
TOPBP1Q92547 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
TOPBP1Q92547 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TOPBP1Q92547 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TOPBP1Q92547 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
TOPBP1Q92547 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC8.49□□□□□ -1.05
TOPBP1Q92547 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.49□□□□□ -1.05
TOPBP1Q92547 RN7SKP227-201ENST00000364445 330 ntBASIC8.49□□□□□ -1.05
TOPBP1Q92547 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TOPBP1Q92547 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
TOPBP1Q92547 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC8.49□□□□□ -1.05
TOPBP1Q92547 AC023141.6-201ENST00000429418 337 ntBASIC8.49□□□□□ -1.05
TOPBP1Q92547 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC8.49□□□□□ -1.05
TOPBP1Q92547 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC8.49□□□□□ -1.05
TOPBP1Q92547 AL109766.1-201ENST00000555080 552 ntBASIC8.49□□□□□ -1.05
TOPBP1Q92547 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC8.49□□□□□ -1.05
TOPBP1Q92547 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TOPBP1Q92547 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
TOPBP1Q92547 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TOPBP1Q92547 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC8.48□□□□□ -1.05
TOPBP1Q92547 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
TOPBP1Q92547 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TOPBP1Q92547 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC8.48□□□□□ -1.05
TOPBP1Q92547 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC8.48□□□□□ -1.05
TOPBP1Q92547 SAMM50P1-201ENST00000455403 1399 ntBASIC8.48□□□□□ -1.05
TOPBP1Q92547 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
TOPBP1Q92547 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
TOPBP1Q92547 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.48□□□□□ -1.05
TOPBP1Q92547 ATP5HP3-201ENST00000396994 486 ntBASIC8.48□□□□□ -1.05
TOPBP1Q92547 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC8.48□□□□□ -1.05
TOPBP1Q92547 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC8.48□□□□□ -1.05
TOPBP1Q92547 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
TOPBP1Q92547 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC8.48□□□□□ -1.05
TOPBP1Q92547 AC067959.1-201ENST00000604334 379 ntBASIC8.48□□□□□ -1.05
TOPBP1Q92547 BNIP3P35-201ENST00000604530 490 ntBASIC8.48□□□□□ -1.05
TOPBP1Q92547 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
TOPBP1Q92547 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC8.48□□□□□ -1.05
TOPBP1Q92547 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TOPBP1Q92547 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
TOPBP1Q92547 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
TOPBP1Q92547 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC8.47□□□□□ -1.05
TOPBP1Q92547 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TOPBP1Q92547 RNA5SP388-201ENST00000362584 119 ntBASIC8.47□□□□□ -1.05
TOPBP1Q92547 RPS26P38-201ENST00000414476 348 ntBASIC8.47□□□□□ -1.05
TOPBP1Q92547 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC8.47□□□□□ -1.05
TOPBP1Q92547 RPS24P16-201ENST00000497294 392 ntBASIC8.47□□□□□ -1.05
TOPBP1Q92547 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
TOPBP1Q92547 AC079298.1-201ENST00000625026 1619 ntBASIC8.47□□□□□ -1.05
TOPBP1Q92547 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC8.47□□□□□ -1.05
TOPBP1Q92547 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC8.46□□□□□ -1.05
TOPBP1Q92547 MTCO1P15-201ENST00000529569 1526 ntBASIC8.46□□□□□ -1.05
TOPBP1Q92547 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC8.46□□□□□ -1.05
TOPBP1Q92547 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC8.46□□□□□ -1.05
TOPBP1Q92547 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
TOPBP1Q92547 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC8.46□□□□□ -1.05
TOPBP1Q92547 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
TOPBP1Q92547 SNORD113.2-201ENST00000364166 89 ntBASIC8.46□□□□□ -1.05
TOPBP1Q92547 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
TOPBP1Q92547 HYALP1-201ENST00000417674 1279 ntBASIC8.46□□□□□ -1.05
TOPBP1Q92547 RPEP3-201ENST00000425462 676 ntBASIC8.46□□□□□ -1.05
TOPBP1Q92547 AC098976.1-201ENST00000513014 541 ntBASIC8.46□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms