Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AC006272.2-201ENST00000594725 163 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AP000769.2-201ENST00000602344 396 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AC009237.13-201ENST00000603193 276 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AC108738.1-201ENST00000603703 237 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AL118522.2-201ENST00000616045 615 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 OR6E1P-201ENST00000414424 923 ntBASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 Z85994.2-201ENST00000434327 452 ntBASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 AC090018.1-201ENST00000434369 367 ntBASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 RAD1P2-201ENST00000446414 663 ntBASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 CBX1P2-201ENST00000453841 458 ntBASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 AC092754.1-201ENST00000472975 479 ntBASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 AP000797.2-201ENST00000475768 606 ntBASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 IGBP1P4-201ENST00000503202 879 ntBASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 SCARNA20.4-201ENST00000516969 131 ntBASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 AP004609.2-201ENST00000532177 190 ntBASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 AC005000.1-201ENST00000536192 288 ntBASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 NPM1P45-201ENST00000583151 559 ntBASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 AC020915.5-201ENST00000596836 964 ntBASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 GMCL1P2-201ENST00000605230 823 ntBASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 AC067838.1-201ENST00000606064 577 ntBASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 MIR6778-201ENST00000617912 73 ntBASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 AC074140.1-201ENST00000621617 208 ntBASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRAF3IP1Q8TDR0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 AL353796.1-201ENST00000561542 3241 ntBASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 RN7SKP292-201ENST00000365522 317 ntBASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 AC079809.1-201ENST00000415468 276 ntBASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 BMS1P17-202ENST00000416720 316 ntBASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 AC002504.1-201ENST00000438281 691 ntBASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 SUMO2P3-201ENST00000438311 288 ntBASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 AC093827.1-201ENST00000480094 861 ntBASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 RPL5P22-201ENST00000480199 884 ntBASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 AC022826.1-201ENST00000519383 805 ntBASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 AC138832.1-201ENST00000522871 556 ntBASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 OR8G3P-201ENST00000533406 921 ntBASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 MIR4505-201ENST00000582238 73 ntBASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 AC009027.1-201ENST00000604510 479 ntBASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.62□□□□□ -1.51
TRAF3IP1Q8TDR0 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms