Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 SNORD56.2-201ENST00000363242 71 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 SNORA7B-201ENST00000384360 139 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 Y_RNA.548-201ENST00000384656 105 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 USP9YP36-201ENST00000424581 829 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AL357632.1-201ENST00000426688 643 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AC008850.1-201ENST00000427546 362 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 RANP5-201ENST00000427731 655 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 CXCR2P1-202ENST00000443392 1074 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 OR6K1P-201ENST00000456766 971 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 SULT1D1P-201ENST00000458020 882 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AC096922.1-201ENST00000461635 651 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 RPS6P25-201ENST00000464444 748 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 RPL23AP12-201ENST00000467573 473 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 OR4A11P-201ENST00000529557 906 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AC063923.2-201ENST00000562158 928 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AL845331.3-202ENST00000562856 261 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AC002519.2-203ENST00000567043 837 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 TPMTP1-201ENST00000592307 737 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 RPL12P25-202ENST00000598100 674 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AC012507.3-201ENST00000603556 477 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 BCRP9-201ENST00000605312 388 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AC019193.2-201ENST00000610012 634 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AC129778.1-202ENST00000623812 261 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AL683826.1-201ENST00000624104 627 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AL591379.1-207ENST00000635982 261 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 MROH3P-201ENST00000435735 2676 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AC097504.1-201ENST00000515103 2415 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 FMO10P-201ENST00000455032 1493 ntBASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.17□□□□□ -1.26
DEPDC4Q8N2C3 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 CTAGE11P-201ENST00000451540 2353 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 SPATA31C2-201ENST00000324915 3777 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 RNU4-73P-201ENST00000363164 141 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 AC093392.1-201ENST00000366280 340 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 FANK1-201ENST00000368689 522 ntTSL 3 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 RNU6-769P-201ENST00000384407 104 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 RNU1-149P-201ENST00000390870 161 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 HMGB1P17-201ENST00000403495 628 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 AL603766.1-201ENST00000407763 664 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 RNA5SP265-201ENST00000411023 111 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 SPA17P1-201ENST00000416656 452 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 FABP7P1-201ENST00000424004 391 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 RPL21P88-201ENST00000436649 436 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 LSM1P1-201ENST00000438629 273 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 AP002856.4-201ENST00000441638 569 ntTSL 4 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms