Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 TTC39DP-201ENST00000416781 1688 ntBASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 NR1H5P-201ENST00000452683 1377 ntBASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 OR6C64P-201ENST00000419708 825 ntBASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 AL133325.1-201ENST00000421090 382 ntBASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 AL389925.1-201ENST00000432257 728 ntBASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 CYCSP12-201ENST00000437729 300 ntBASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 DNAJB5P1-201ENST00000454004 806 ntBASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 RN7SL184P-201ENST00000488308 297 ntBASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 AC098976.1-201ENST00000513014 541 ntBASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 OR10D4P-201ENST00000525892 951 ntBASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 AC027216.1-201ENST00000577726 685 ntBASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 AC007204.2-201ENST00000615022 616 ntBASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 AC005840.5-201ENST00000619166 599 ntBASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CCDC65Q8IXS2 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.9□□□□□ -1.47
CCDC65Q8IXS2 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC65Q8IXS2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
CCDC65Q8IXS2 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.9□□□□□ -1.47
CCDC65Q8IXS2 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC65Q8IXS2 OR4G1P-202ENST00000641173 1788 ntBASIC5.9□□□□□ -1.47
CCDC65Q8IXS2 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 CDY11P-201ENST00000447168 1651 ntBASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 AC003985.2-201ENST00000562268 1669 ntBASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 RNA5SP132-201ENST00000364725 118 ntBASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 MIR105-1-201ENST00000385222 81 ntBASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 RNA5SP339-201ENST00000390987 122 ntBASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 AC009804.1-201ENST00000400949 179 ntBASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 AL390774.1-201ENST00000411924 246 ntBASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 AC007386.1-201ENST00000455212 582 ntBASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 AL133445.1-201ENST00000467051 452 ntBASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 RPL7P41-201ENST00000485823 957 ntBASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 RPL15P21-201ENST00000495592 567 ntBASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 RPEP1-201ENST00000504507 658 ntBASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 IGLVIV-64-201ENST00000518581 301 ntBASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 IGKV3D-34-201ENST00000522638 302 ntBASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 NMNAT1P5-201ENST00000559657 841 ntBASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 AC009597.2-201ENST00000604659 592 ntBASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 CDC27P2-201ENST00000425026 1922 ntBASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC65Q8IXS2 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 CBX1P3-201ENST00000413296 527 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AL121776.1-201ENST00000429337 372 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 FAM96AP1-201ENST00000430879 482 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AC104634.1-201ENST00000452720 462 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 RN7SL174P-201ENST00000475578 289 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AC017007.3-201ENST00000479865 435 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AL671862.1-201ENST00000515851 349 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 RNA5SP362-201ENST00000516048 118 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms