Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.37□□□□□ -1.23
LYSMD3Q7Z3D4 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.37□□□□□ -1.23
LYSMD3Q7Z3D4 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.37□□□□□ -1.23
LYSMD3Q7Z3D4 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LYSMD3Q7Z3D4 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.37□□□□□ -1.23
LYSMD3Q7Z3D4 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.37□□□□□ -1.23
LYSMD3Q7Z3D4 AL136298.2-201ENST00000556497 1570 ntBASIC7.37□□□□□ -1.23
LYSMD3Q7Z3D4 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
LYSMD3Q7Z3D4 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LYSMD3Q7Z3D4 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AC138915.3-201ENST00000562908 1389 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 DCAF13P1-201ENST00000495256 1330 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 OR2M1P-201ENST00000318104 951 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 RNU6-433P-201ENST00000363216 104 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 RPL5P5-201ENST00000392009 893 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 Z97832.1-201ENST00000402490 328 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 Y_RNA.598-201ENST00000410480 95 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 FDPSP1-201ENST00000424976 1071 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 RPL5P34-201ENST00000426545 891 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AL358934.1-201ENST00000432346 324 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AL353803.3-201ENST00000444641 335 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 RN7SL251P-201ENST00000464175 297 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AC074386.1-201ENST00000476560 767 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 RN7SL152P-201ENST00000484176 298 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 EIF4E2P2-201ENST00000492033 736 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 DYNLL1P6-201ENST00000503440 264 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 MTND4LP22-201ENST00000508209 276 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AC010486.1-201ENST00000511793 424 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 RN7SKP31-201ENST00000516354 278 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AL512310.1-201ENST00000548639 172 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 UBE2CP4-201ENST00000561405 535 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AC026470.2-201ENST00000561492 181 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AL355375.2-201ENST00000574825 175 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AC090241.1-201ENST00000587732 621 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 VN1R80P-201ENST00000597126 338 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 SUGT1P3-202ENST00000604259 383 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AC004890.3-201ENST00000605566 1095 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AC108479.2-201ENST00000617314 601 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 SEC63P2-201ENST00000503863 1939 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 AC119674.1-202ENST00000641333 1860 ntBASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.36□□□□□ -1.23
LYSMD3Q7Z3D4 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
LYSMD3Q7Z3D4 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms