Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 AC114322.1-201ENST00000506771 926 ntBASIC5.7□□□□□ -1.5
RNF44Q7L0R7 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 WBP1LP3-201ENST00000523033 208 ntBASIC5.7□□□□□ -1.5
RNF44Q7L0R7 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 AC244502.2-201ENST00000543361 851 ntBASIC5.7□□□□□ -1.5
RNF44Q7L0R7 NANOGNBP2-201ENST00000544753 553 ntBASIC5.7□□□□□ -1.5
RNF44Q7L0R7 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 AC084824.2-201ENST00000548906 345 ntBASIC5.7□□□□□ -1.5
RNF44Q7L0R7 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 HMGN2P47-201ENST00000559378 272 ntBASIC5.7□□□□□ -1.5
RNF44Q7L0R7 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 VN1R87P-201ENST00000596706 487 ntBASIC5.7□□□□□ -1.5
RNF44Q7L0R7 CLIC4P2-201ENST00000601934 717 ntBASIC5.7□□□□□ -1.5
RNF44Q7L0R7 AP002906.1-201ENST00000603405 233 ntBASIC5.7□□□□□ -1.5
RNF44Q7L0R7 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 AC140725.3-201ENST00000616193 880 ntBASIC5.7□□□□□ -1.5
RNF44Q7L0R7 AC073569.3-201ENST00000619055 682 ntBASIC5.7□□□□□ -1.5
RNF44Q7L0R7 AC008115.4-201ENST00000619780 775 ntBASIC5.7□□□□□ -1.5
RNF44Q7L0R7 AL162377.2-201ENST00000624532 337 ntBASIC5.7□□□□□ -1.5
RNF44Q7L0R7 AC129915.3-201ENST00000634128 948 ntBASIC5.7□□□□□ -1.5
RNF44Q7L0R7 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF44Q7L0R7 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AL662795.2-201ENST00000624252 3706 ntBASIC5.69□□□□□ -1.5
RNF44Q7L0R7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 RNA5SP27-201ENST00000363839 119 ntBASIC5.69□□□□□ -1.5
RNF44Q7L0R7 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 RNU6-932P-201ENST00000391108 106 ntBASIC5.69□□□□□ -1.5
RNF44Q7L0R7 RNA5SP498-201ENST00000411342 120 ntBASIC5.69□□□□□ -1.5
RNF44Q7L0R7 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 USP9YP21-201ENST00000420603 432 ntBASIC5.69□□□□□ -1.5
RNF44Q7L0R7 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 OSTCP5-201ENST00000425293 453 ntBASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 TPTE2P3-201ENST00000441562 1189 ntBASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AL445687.2-201ENST00000458156 728 ntBASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AL355032.1-201ENST00000472981 438 ntBASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 RN7SKP265-201ENST00000516448 223 ntBASIC5.69□□□□□ -1.5
RNF44Q7L0R7 Y_RNA.717-201ENST00000517106 92 ntBASIC5.69□□□□□ -1.5
RNF44Q7L0R7 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AC079064.1-201ENST00000528365 362 ntBASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AP004609.2-201ENST00000532177 190 ntBASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AL049779.3-201ENST00000557141 606 ntBASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AC103703.1-201ENST00000634783 663 ntBASIC5.69□□□□□ -1.5
RNF44Q7L0R7 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 AC093297.3-201ENST00000607056 2517 ntBASIC5.69□□□□□ -1.5
RNF44Q7L0R7 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF44Q7L0R7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RNF44Q7L0R7 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.68□□□□□ -1.5
RNF44Q7L0R7 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms