Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AL034408.1-201ENST00000637712 664 ntBASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 LARS-201ENST00000274562 2213 ntTSL 2 BASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AL590240.1-201ENST00000334118 313 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AL049697.2-201ENST00000403708 294 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 LINC02210-201ENST00000444561 288 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 FGB-207ENST00000509493 1164 ntTSL 5 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AC084824.1-201ENST00000550917 1005 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 BNIP3P33-201ENST00000598912 569 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AC067959.1-201ENST00000604334 379 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 Z97832.1-201ENST00000402490 328 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 RN7SKP106-201ENST00000410832 272 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AF186996.5-201ENST00000418098 904 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 RPL12P34-201ENST00000424532 479 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AC005154.2-201ENST00000438110 379 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 OR1H1P-201ENST00000448731 937 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AC010733.1-201ENST00000451515 401 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 RN7SL319P-201ENST00000480656 221 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AC097173.1-201ENST00000505862 819 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 GAPDHP62-201ENST00000515313 990 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AC012339.2-201ENST00000523996 453 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 ARL1-211ENST00000551828 776 ntTSL 5 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AC069366.1-201ENST00000583159 838 ntBASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC8.38□□□□□ -1.07
SNAPC4Q5SXM2 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 LCOR-201ENST00000286067 4542 ntBASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 AL359715.3-201ENST00000569267 2123 ntBASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 OFD1P8Y-201ENST00000449148 1433 ntBASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 OR4K15-201ENST00000305051 1216 ntBASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 AL732292.1-201ENST00000426692 226 ntBASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 NPM1P33-201ENST00000438918 872 ntBASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 REG1CP-206ENST00000447469 496 ntBASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 TCEA1P1-201ENST00000449716 880 ntBASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 RN7SKP276-201ENST00000516242 268 ntBASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 EIF1P5-201ENST00000585002 234 ntBASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 CCDC58P3-201ENST00000590792 430 ntBASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 AL161637.1-201ENST00000622380 412 ntBASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNAPC4Q5SXM2 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 ASNSP1-204ENST00000641977 1664 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms