Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 PTGES3P1-201ENST00000439531 483 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AC245047.2-201ENST00000441060 530 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 VN1R25P-201ENST00000443385 738 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AL050341.1-201ENST00000447743 313 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 RPL31P15-201ENST00000449770 338 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AC092155.2-201ENST00000454675 477 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 RPL7P48-201ENST00000461513 746 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AC005412.2-201ENST00000492004 341 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 IMPA1P1-201ENST00000510718 842 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 CR383658.1-201ENST00000514609 734 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AP003396.4-201ENST00000527574 265 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 OR7E128P-201ENST00000532736 1024 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AC234772.3-201ENST00000602277 528 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AC125494.3-201ENST00000602759 455 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 RPL12P48-201ENST00000605620 304 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 STMN1P1-201ENST00000617809 440 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 SMG1P7-201ENST00000565246 2704 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 HMGB3P18-201ENST00000406327 590 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 RN7SKP229-201ENST00000410465 302 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC092638.1-201ENST00000411966 1275 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 HIGD1AP15-201ENST00000416198 280 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC092648.1-201ENST00000425870 423 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 MTND6P12-201ENST00000428247 522 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 VN1R38P-201ENST00000450265 887 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 CFL1P4-201ENST00000451536 498 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 OFD1P7Y-201ENST00000454643 1155 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 NXT1P1-201ENST00000458481 316 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 RN7SL214P-201ENST00000487317 265 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC104108.1-201ENST00000509930 412 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC106800.3-201ENST00000511389 308 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC119751.1-201ENST00000513357 765 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 Y_RNA.667-201ENST00000516212 107 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 SCARNA21.2-201ENST00000516600 166 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 IGKV1D-22-201ENST00000518953 324 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 228.3 ms