Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCS1Q01581 AC004817.4-201ENST00000602396 3625 ntBASIC5.06□□□□□ -1.6
HMGCS1Q01581 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCS1Q01581 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCS1Q01581 OR9K1P-201ENST00000326513 941 ntBASIC5.06□□□□□ -1.6
HMGCS1Q01581 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCS1Q01581 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 MIR105-1-201ENST00000385222 81 ntBASIC5.06□□□□□ -1.6
HMGCS1Q01581 AC092642.1-201ENST00000392417 425 ntBASIC5.06□□□□□ -1.6
HMGCS1Q01581 AL358178.1-201ENST00000407698 397 ntBASIC5.06□□□□□ -1.6
HMGCS1Q01581 RNA5SP487-201ENST00000410186 122 ntBASIC5.06□□□□□ -1.6
HMGCS1Q01581 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 DSTNP5-201ENST00000427921 523 ntBASIC5.06□□□□□ -1.6
HMGCS1Q01581 BX119904.3-201ENST00000428194 957 ntBASIC5.06□□□□□ -1.6
HMGCS1Q01581 CLUHP1-201ENST00000435012 1190 ntBASIC5.06□□□□□ -1.6
HMGCS1Q01581 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 AC079168.1-201ENST00000458741 345 ntBASIC5.06□□□□□ -1.6
HMGCS1Q01581 AC100832.1-201ENST00000471945 383 ntBASIC5.06□□□□□ -1.6
HMGCS1Q01581 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCS1Q01581 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCS1Q01581 RN7SL708P-201ENST00000580952 299 ntBASIC5.06□□□□□ -1.6
HMGCS1Q01581 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCS1Q01581 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 AC009597.2-201ENST00000604659 592 ntBASIC5.06□□□□□ -1.6
HMGCS1Q01581 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCS1Q01581 AL049767.1-202ENST00000637826 242 ntBASIC5.06□□□□□ -1.6
HMGCS1Q01581 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.06□□□□□ -1.6
HMGCS1Q01581 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCS1Q01581 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCS1Q01581 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 CASC19-248ENST00000641674 1356 ntBASIC5.05□□□□□ -1.6
HMGCS1Q01581 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCS1Q01581 AC022417.1-201ENST00000624768 1303 ntBASIC5.05□□□□□ -1.6
HMGCS1Q01581 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCS1Q01581 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCS1Q01581 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 RNA5SP223-201ENST00000365174 120 ntBASIC5.05□□□□□ -1.6
HMGCS1Q01581 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 RNU1-77P-201ENST00000390868 162 ntBASIC5.05□□□□□ -1.6
HMGCS1Q01581 RNU6-233P-201ENST00000410845 141 ntBASIC5.05□□□□□ -1.6
HMGCS1Q01581 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 AC114982.2-201ENST00000461396 358 ntBASIC5.05□□□□□ -1.6
HMGCS1Q01581 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 RN7SL189P-201ENST00000468631 289 ntBASIC5.05□□□□□ -1.6
HMGCS1Q01581 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 RNA5SP362-201ENST00000516048 118 ntBASIC5.05□□□□□ -1.6
HMGCS1Q01581 RNA5SP373-201ENST00000517271 95 ntBASIC5.05□□□□□ -1.6
HMGCS1Q01581 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 HMGB1P40-201ENST00000525121 540 ntBASIC5.05□□□□□ -1.6
HMGCS1Q01581 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 RPL10P14-201ENST00000565265 298 ntBASIC5.05□□□□□ -1.6
HMGCS1Q01581 AC106730.2-201ENST00000566641 540 ntBASIC5.05□□□□□ -1.6
HMGCS1Q01581 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 MIR6862-1-201ENST00000613016 70 ntBASIC5.05□□□□□ -1.6
HMGCS1Q01581 MIR6862-2-201ENST00000614755 70 ntBASIC5.05□□□□□ -1.6
HMGCS1Q01581 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCS1Q01581 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCS1Q01581 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCS1Q01581 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCS1Q01581 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.05□□□□□ -1.6
HMGCS1Q01581 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCS1Q01581 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCS1Q01581 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
HMGCS1Q01581 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGCS1Q01581 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HMGCS1Q01581 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HMGCS1Q01581 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGCS1Q01581 AC063976.2-201ENST00000425667 3556 ntBASIC5.04□□□□□ -1.6
HMGCS1Q01581 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGCS1Q01581 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGCS1Q01581 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGCS1Q01581 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGCS1Q01581 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGCS1Q01581 AC005294.1-201ENST00000355509 281 ntBASIC5.04□□□□□ -1.6
HMGCS1Q01581 RNA5SP132-201ENST00000364725 118 ntBASIC5.04□□□□□ -1.6
HMGCS1Q01581 U3.25-201ENST00000391209 220 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms