Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK3Q00526 RNU6-171P-201ENST00000384354 107 ntBASIC5.39□□□□□ -1.55
CDK3Q00526 AL133388.1-201ENST00000404509 287 ntBASIC5.39□□□□□ -1.55
CDK3Q00526 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.39□□□□□ -1.55
CDK3Q00526 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK3Q00526 DSTNP5-201ENST00000427921 523 ntBASIC5.39□□□□□ -1.55
CDK3Q00526 MTND4LP7-201ENST00000431728 294 ntBASIC5.39□□□□□ -1.55
CDK3Q00526 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK3Q00526 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK3Q00526 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK3Q00526 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK3Q00526 AL691517.1-201ENST00000440833 1235 ntBASIC5.39□□□□□ -1.55
CDK3Q00526 LINC02210-201ENST00000444561 288 ntBASIC5.39□□□□□ -1.55
CDK3Q00526 AL163193.1-201ENST00000444895 788 ntBASIC5.39□□□□□ -1.55
CDK3Q00526 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK3Q00526 BUD31P2-201ENST00000449374 300 ntBASIC5.39□□□□□ -1.55
CDK3Q00526 STRADBP1-201ENST00000478954 1281 ntBASIC5.39□□□□□ -1.55
CDK3Q00526 RPS4XP1-201ENST00000482189 787 ntBASIC5.39□□□□□ -1.55
CDK3Q00526 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK3Q00526 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.39□□□□□ -1.55
CDK3Q00526 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.39□□□□□ -1.55
CDK3Q00526 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK3Q00526 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.39□□□□□ -1.55
CDK3Q00526 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK3Q00526 AL049779.2-201ENST00000553847 315 ntBASIC5.39□□□□□ -1.55
CDK3Q00526 AC092868.3-201ENST00000560515 784 ntBASIC5.39□□□□□ -1.55
CDK3Q00526 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK3Q00526 RBM22P1-201ENST00000578589 1214 ntBASIC5.39□□□□□ -1.55
CDK3Q00526 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK3Q00526 AL512329.2-201ENST00000607350 548 ntBASIC5.39□□□□□ -1.55
CDK3Q00526 AL592494.3-201ENST00000609485 464 ntBASIC5.39□□□□□ -1.55
CDK3Q00526 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK3Q00526 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK3Q00526 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK3Q00526 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK3Q00526 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK3Q00526 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.39□□□□□ -1.55
CDK3Q00526 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK3Q00526 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK3Q00526 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDK3Q00526 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK3Q00526 AL356317.1-201ENST00000396110 1436 ntBASIC5.39□□□□□ -1.55
CDK3Q00526 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CDK3Q00526 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK3Q00526 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK3Q00526 AC011503.2-201ENST00000594230 1500 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CDK3Q00526 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK3Q00526 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK3Q00526 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK3Q00526 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK3Q00526 AL360270.2-201ENST00000562952 5985 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK3Q00526 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK3Q00526 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.38□□□□□ -1.55
CDK3Q00526 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK3Q00526 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK3Q00526 AC140479.2-201ENST00000421567 3130 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK3Q00526 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK3Q00526 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK3Q00526 RNU4-39P-201ENST00000362455 127 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 OR13C3-201ENST00000374781 1108 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 RNA5SP339-201ENST00000390987 122 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.38□□□□□ -1.55
CDK3Q00526 SLC35E1P1-201ENST00000419313 864 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK3Q00526 FAR1P1-201ENST00000427163 934 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK3Q00526 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.38□□□□□ -1.55
CDK3Q00526 RPL12P17-201ENST00000432393 498 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 SNRPFP2-201ENST00000440710 251 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.38□□□□□ -1.55
CDK3Q00526 REG1CP-206ENST00000447469 496 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK3Q00526 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK3Q00526 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK3Q00526 AC104629.2-201ENST00000468627 598 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 CR383656.1-201ENST00000484916 377 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.38□□□□□ -1.55
CDK3Q00526 SUMO2P4-201ENST00000504193 276 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 PGAM1P13-201ENST00000507497 754 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 AC093815.1-201ENST00000508637 280 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.38□□□□□ -1.55
CDK3Q00526 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK3Q00526 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK3Q00526 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK3Q00526 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK3Q00526 HMGB1P40-201ENST00000525121 540 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CDK3Q00526 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK3Q00526 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CDK3Q00526 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDK3Q00526 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.38□□□□□ -1.55
CDK3Q00526 AP001357.1-201ENST00000586304 1053 ntBASIC5.38□□□□□ -1.55
CDK3Q00526 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK3Q00526 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK3Q00526 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK3Q00526 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms