Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCL20P78556 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.01□□□□□ -1.77
CCL20P78556 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.01□□□□□ -1.77
CCL20P78556 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CCL20P78556 AC008549.2-201ENST00000333482 706 ntBASIC4.01□□□□□ -1.77
CCL20P78556 TMSB4XP2-201ENST00000335179 210 ntBASIC4.01□□□□□ -1.77
CCL20P78556 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCL20P78556 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.01□□□□□ -1.77
CCL20P78556 MIR27A-201ENST00000385073 78 ntBASIC4.01□□□□□ -1.77
CCL20P78556 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCL20P78556 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCL20P78556 YWHAZP6-201ENST00000399764 738 ntBASIC4.01□□□□□ -1.77
CCL20P78556 AL133260.1-201ENST00000405720 405 ntBASIC4.01□□□□□ -1.77
CCL20P78556 CYCSP10-201ENST00000417973 294 ntBASIC4.01□□□□□ -1.77
CCL20P78556 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCL20P78556 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.01□□□□□ -1.77
CCL20P78556 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.01□□□□□ -1.77
CCL20P78556 EIF4HP2-201ENST00000424380 563 ntBASIC4.01□□□□□ -1.77
CCL20P78556 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCL20P78556 COX6CP13-201ENST00000428703 226 ntBASIC4.01□□□□□ -1.77
CCL20P78556 GSTM5P1-201ENST00000434751 660 ntBASIC4.01□□□□□ -1.77
CCL20P78556 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CCL20P78556 NDUFS5P5-201ENST00000437256 321 ntBASIC4.01□□□□□ -1.77
CCL20P78556 RPEP4-201ENST00000437636 602 ntBASIC4.01□□□□□ -1.77
CCL20P78556 RPS26P2-201ENST00000440331 348 ntBASIC4.01□□□□□ -1.77
CCL20P78556 ATP5LP2-201ENST00000440646 311 ntBASIC4.01□□□□□ -1.77
CCL20P78556 RBMY2AP-201ENST00000445405 1157 ntBASIC4.01□□□□□ -1.77
CCL20P78556 RBMY2CP-201ENST00000448575 1157 ntBASIC4.01□□□□□ -1.77
CCL20P78556 RBMY2DP-202ENST00000448881 1157 ntBASIC4.01□□□□□ -1.77
CCL20P78556 RBMY2BP-202ENST00000451071 1156 ntBASIC4.01□□□□□ -1.77
CCL20P78556 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.01□□□□□ -1.77
CCL20P78556 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.01□□□□□ -1.77
CCL20P78556 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCL20P78556 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.01□□□□□ -1.77
CCL20P78556 SCARNA16.4-201ENST00000516956 187 ntBASIC4.01□□□□□ -1.77
CCL20P78556 RNA5SP340-201ENST00000517132 107 ntBASIC4.01□□□□□ -1.77
CCL20P78556 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.01□□□□□ -1.77
CCL20P78556 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.01□□□□□ -1.77
CCL20P78556 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.01□□□□□ -1.77
CCL20P78556 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.01□□□□□ -1.77
CCL20P78556 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCL20P78556 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.01□□□□□ -1.77
CCL20P78556 AC116553.2-201ENST00000564203 463 ntBASIC4.01□□□□□ -1.77
CCL20P78556 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.01□□□□□ -1.77
CCL20P78556 WBP1LP12-201ENST00000604449 331 ntBASIC4.01□□□□□ -1.77
CCL20P78556 AC005252.1-201ENST00000604518 1063 ntBASIC4.01□□□□□ -1.77
CCL20P78556 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC4.01□□□□□ -1.77
CCL20P78556 MIR6070-201ENST00000613967 103 ntBASIC4.01□□□□□ -1.77
CCL20P78556 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.01□□□□□ -1.77
CCL20P78556 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCL20P78556 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.01□□□□□ -1.77
CCL20P78556 AC026523.2-201ENST00000625039 7739 ntBASIC4.01□□□□□ -1.77
CCL20P78556 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCL20P78556 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCL20P78556 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.01□□□□□ -1.77
CCL20P78556 CASC19-238ENST00000641523 1558 ntBASIC4.01□□□□□ -1.77
CCL20P78556 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCL20P78556 AC068446.1-201ENST00000556425 1549 ntBASIC4□□□□□ -1.77
CCL20P78556 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CCL20P78556 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCL20P78556 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CCL20P78556 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CCL20P78556 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCL20P78556 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
CCL20P78556 AC139713.2-215ENST00000641428 5037 ntBASIC4□□□□□ -1.77
CCL20P78556 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCL20P78556 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4□□□□□ -1.77
CCL20P78556 RN7SKP104-201ENST00000362605 328 ntBASIC4□□□□□ -1.77
CCL20P78556 RNU1-83P-201ENST00000363426 164 ntBASIC4□□□□□ -1.77
CCL20P78556 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4□□□□□ -1.77
CCL20P78556 SNORA66-201ENST00000384792 133 ntBASIC4□□□□□ -1.77
CCL20P78556 MIR195-201ENST00000385194 87 ntBASIC4□□□□□ -1.77
CCL20P78556 HSPA8P15-201ENST00000401676 786 ntBASIC4□□□□□ -1.77
CCL20P78556 OR4K12P-201ENST00000406538 961 ntBASIC4□□□□□ -1.77
CCL20P78556 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4□□□□□ -1.77
CCL20P78556 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC4□□□□□ -1.77
CCL20P78556 AC245060.4-201ENST00000413293 1121 ntBASIC4□□□□□ -1.77
CCL20P78556 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4□□□□□ -1.77
CCL20P78556 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4□□□□□ -1.77
CCL20P78556 AC234781.4-201ENST00000419384 244 ntBASIC4□□□□□ -1.77
CCL20P78556 SRSF1P1-201ENST00000424058 520 ntBASIC4□□□□□ -1.77
CCL20P78556 AL161722.2-201ENST00000434731 981 ntBASIC4□□□□□ -1.77
CCL20P78556 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
CCL20P78556 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCL20P78556 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC4□□□□□ -1.77
CCL20P78556 RPL5P7-201ENST00000444235 813 ntBASIC4□□□□□ -1.77
CCL20P78556 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4□□□□□ -1.77
CCL20P78556 Z80107.2-201ENST00000445127 392 ntBASIC4□□□□□ -1.77
CCL20P78556 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4□□□□□ -1.77
CCL20P78556 AC005008.1-201ENST00000456151 612 ntBASIC4□□□□□ -1.77
CCL20P78556 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4□□□□□ -1.77
CCL20P78556 RPS27P20-201ENST00000492051 246 ntBASIC4□□□□□ -1.77
CCL20P78556 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4□□□□□ -1.77
CCL20P78556 RNA5SP75-201ENST00000516841 111 ntBASIC4□□□□□ -1.77
CCL20P78556 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4□□□□□ -1.77
CCL20P78556 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC4□□□□□ -1.77
CCL20P78556 OR10D4P-201ENST00000525892 951 ntBASIC4□□□□□ -1.77
CCL20P78556 EIF4A2P5-201ENST00000529914 499 ntBASIC4□□□□□ -1.77
CCL20P78556 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4□□□□□ -1.77
CCL20P78556 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms