Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN12P56749 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN12P56749 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN12P56749 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN12P56749 SOCS5P3-201ENST00000425115 1576 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN12P56749 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN12P56749 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN12P56749 RN7SKP28-201ENST00000364770 305 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN12P56749 FAM183DP-201ENST00000421987 399 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN12P56749 RPL34P6-201ENST00000432390 345 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 GAPDHP58-201ENST00000438477 1006 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 NPM1P33-201ENST00000438918 872 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN12P56749 AC073909.1-201ENST00000447112 999 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 AL672138.1-201ENST00000450604 1015 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
CLDN12P56749 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN12P56749 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.54□□□□□ -1.68
CLDN12P56749 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN12P56749 AP002981.1-201ENST00000517692 975 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN12P56749 AC105036.1-201ENST00000566222 271 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 RN7SL708P-201ENST00000580952 299 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 AC011840.5-201ENST00000582125 771 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN12P56749 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN12P56749 AL162431.4-201ENST00000604674 411 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 MIR6813-201ENST00000621638 56 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 MTCO1P1-201ENST00000624263 1081 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 CASC19-274ENST00000642018 970 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN12P56749 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
CLDN12P56749 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN12P56749 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN12P56749 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN12P56749 YES1P1-201ENST00000418510 1628 ntBASIC4.54□□□□□ -1.68
CLDN12P56749 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.53□□□□□ -1.68
CLDN12P56749 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.53□□□□□ -1.68
CLDN12P56749 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CLDN12P56749 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN12P56749 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN12P56749 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.53□□□□□ -1.68
CLDN12P56749 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CLDN12P56749 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN12P56749 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.53□□□□□ -1.68
CLDN12P56749 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN12P56749 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN12P56749 MIR375-201ENST00000362103 64 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CLDN12P56749 GAPDHP15-201ENST00000398586 975 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 SRSF1P1-201ENST00000424058 520 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN12P56749 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN12P56749 OR2AH1P-201ENST00000425717 928 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 AL662874.1-201ENST00000426065 230 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 BX119321.1-201ENST00000428912 797 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
CLDN12P56749 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN12P56749 CLUHP1-201ENST00000435012 1190 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 NPM1P48-201ENST00000436002 853 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN12P56749 AC019185.1-201ENST00000442718 389 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 AL450996.1-201ENST00000445574 1202 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 TIMM8BP2-201ENST00000445940 251 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 BX842559.2-201ENST00000451418 605 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 CTSLP6-201ENST00000458273 1002 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 RN7SL189P-201ENST00000468631 289 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 RN7SL423P-201ENST00000486202 304 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 RN7SKP99-201ENST00000517028 307 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN12P56749 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.53□□□□□ -1.68
CLDN12P56749 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN12P56749 QTRT1P1-201ENST00000604344 1078 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN12P56749 HTR1DP1-201ENST00000616500 888 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN12P56749 BX005214.3-202ENST00000619809 325 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
CLDN12P56749 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.53□□□□□ -1.68
CLDN12P56749 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN12P56749 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
CLDN12P56749 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN12P56749 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CLDN12P56749 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
CLDN12P56749 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLDN12P56749 AL731566.1-201ENST00000620490 1937 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
CLDN12P56749 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CLDN12P56749 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN12P56749 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CLDN12P56749 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLDN12P56749 OR7E25P-201ENST00000344844 931 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 RN7SKP184-201ENST00000362348 333 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms