Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.08□□□□□ -1.44
GFRA1P56159 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.08□□□□□ -1.44
GFRA1P56159 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.08□□□□□ -1.44
GFRA1P56159 RN7SL199P-201ENST00000578752 281 ntBASIC6.08□□□□□ -1.44
GFRA1P56159 RN7SL656P-201ENST00000579044 281 ntBASIC6.08□□□□□ -1.44
GFRA1P56159 RN7SL404P-201ENST00000582421 281 ntBASIC6.08□□□□□ -1.44
GFRA1P56159 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC6.08□□□□□ -1.44
GFRA1P56159 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.08□□□□□ -1.44
GFRA1P56159 AC087683.1-201ENST00000591187 441 ntBASIC6.08□□□□□ -1.44
GFRA1P56159 AC091133.5-201ENST00000603088 301 ntBASIC6.08□□□□□ -1.44
GFRA1P56159 AC067773.1-201ENST00000603284 1094 ntBASIC6.08□□□□□ -1.44
GFRA1P56159 AC087241.4-201ENST00000612441 480 ntBASIC6.08□□□□□ -1.44
GFRA1P56159 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.08□□□□□ -1.44
GFRA1P56159 AC010678.1-201ENST00000614118 713 ntBASIC6.08□□□□□ -1.44
GFRA1P56159 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
GFRA1P56159 AC244100.4-201ENST00000617747 388 ntBASIC6.08□□□□□ -1.44
GFRA1P56159 MIR6813-201ENST00000621638 56 ntBASIC6.08□□□□□ -1.44
GFRA1P56159 AC091932.2-201ENST00000623014 291 ntBASIC6.08□□□□□ -1.44
GFRA1P56159 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
GFRA1P56159 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.08□□□□□ -1.44
GFRA1P56159 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
GFRA1P56159 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA1P56159 RACGAP1P-201ENST00000550663 1879 ntBASIC6.08□□□□□ -1.44
GFRA1P56159 AL669831.5-218ENST00000591702 1873 ntBASIC6.08□□□□□ -1.44
GFRA1P56159 CASC19-284ENST00000642142 1868 ntBASIC6.08□□□□□ -1.44
GFRA1P56159 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA1P56159 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.08□□□□□ -1.44
GFRA1P56159 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA1P56159 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
GFRA1P56159 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA1P56159 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.08□□□□□ -1.44
GFRA1P56159 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.08□□□□□ -1.44
GFRA1P56159 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA1P56159 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA1P56159 AC105749.1-201ENST00000631338 2008 ntBASIC6.08□□□□□ -1.44
GFRA1P56159 AL603750.1-201ENST00000624216 1717 ntBASIC6.08□□□□□ -1.44
GFRA1P56159 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.08□□□□□ -1.44
GFRA1P56159 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA1P56159 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA1P56159 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
GFRA1P56159 DDX18P4-201ENST00000511690 1966 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA1P56159 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
GFRA1P56159 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.07□□□□□ -1.44
GFRA1P56159 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA1P56159 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.07□□□□□ -1.44
GFRA1P56159 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.07□□□□□ -1.44
GFRA1P56159 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA1P56159 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.07□□□□□ -1.44
GFRA1P56159 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA1P56159 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
GFRA1P56159 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA1P56159 RNU6-839P-201ENST00000363347 108 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 RNU6-619P-201ENST00000365146 108 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 Y_RNA.408-201ENST00000383987 102 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 SNORA7A-201ENST00000384765 139 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 MIR217-201ENST00000384817 110 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA1P56159 RNA5SP155-201ENST00000411154 129 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 AL450992.3-201ENST00000413192 568 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.07□□□□□ -1.44
GFRA1P56159 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC6.07□□□□□ -1.44
GFRA1P56159 Z82198.3-201ENST00000421145 199 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 FAM183DP-201ENST00000421987 399 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.07□□□□□ -1.44
GFRA1P56159 NPM1P22-201ENST00000427761 952 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 AC007559.1-201ENST00000428736 355 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 AC239367.3-201ENST00000428996 814 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.07□□□□□ -1.44
GFRA1P56159 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC6.07□□□□□ -1.44
GFRA1P56159 CYCSP11-201ENST00000436426 315 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 RPEP4-201ENST00000437636 602 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 AL357520.1-201ENST00000441557 453 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 BMI1P1-201ENST00000445879 941 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 COX6CP18-201ENST00000448769 222 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 AL390728.3-201ENST00000452704 270 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 RPL26P30-201ENST00000453533 435 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 AKR1D1P1-201ENST00000457236 936 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.07□□□□□ -1.44
GFRA1P56159 AC021006.1-201ENST00000489849 553 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.07□□□□□ -1.44
GFRA1P56159 AL035404.1-201ENST00000497982 568 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA1P56159 IGBP1P5-201ENST00000507524 1000 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 AC090071.1-201ENST00000507713 644 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.07□□□□□ -1.44
GFRA1P56159 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.07□□□□□ -1.44
GFRA1P56159 AC138832.1-201ENST00000522871 556 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.07□□□□□ -1.44
GFRA1P56159 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC6.07□□□□□ -1.44
GFRA1P56159 AC005519.1-201ENST00000554490 601 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 NMNAT1P5-201ENST00000559657 841 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA1P56159 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC6.07□□□□□ -1.44
GFRA1P56159 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.07□□□□□ -1.44
GFRA1P56159 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.07□□□□□ -1.44
GFRA1P56159 RN7SL66P-201ENST00000582099 264 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 RPL29P33-201ENST00000587474 316 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms