Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC006272.2-201ENST00000594725 163 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 AL499605.1-201ENST00000604628 403 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 AL162431.4-201ENST00000604674 411 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 AC100767.2-201ENST00000604840 693 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 RNU6-84P-201ENST00000607737 102 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PKNOX1P55347 AL122125.1-201ENST00000616999 600 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PKNOX1P55347 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PKNOX1P55347 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PKNOX1P55347 CR383656.5-201ENST00000547616 1340 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PKNOX1P55347 CASC19-248ENST00000641674 1356 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 AL022322.2-201ENST00000624072 20397 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
PKNOX1P55347 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PKNOX1P55347 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
PKNOX1P55347 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
PKNOX1P55347 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
PKNOX1P55347 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PKNOX1P55347 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PKNOX1P55347 AC006210.2-201ENST00000367074 1545 ntBASIC5.15□□□□□ -1.58
PKNOX1P55347 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.15□□□□□ -1.59
PKNOX1P55347 RN7SKP292-201ENST00000365522 317 ntBASIC5.15□□□□□ -1.59
PKNOX1P55347 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.15□□□□□ -1.59
PKNOX1P55347 MIR589-201ENST00000385238 99 ntBASIC5.15□□□□□ -1.59
PKNOX1P55347 HSPA8P15-201ENST00000401676 786 ntBASIC5.15□□□□□ -1.59
PKNOX1P55347 RNA5SP487-201ENST00000410186 122 ntBASIC5.15□□□□□ -1.59
PKNOX1P55347 SDHDP6-201ENST00000414693 480 ntBASIC5.15□□□□□ -1.59
PKNOX1P55347 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.15□□□□□ -1.59
PKNOX1P55347 NOP56P2-201ENST00000447491 769 ntBASIC5.15□□□□□ -1.59
PKNOX1P55347 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.15□□□□□ -1.59
PKNOX1P55347 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.15□□□□□ -1.59
PKNOX1P55347 AC069304.1-201ENST00000491593 704 ntBASIC5.15□□□□□ -1.59
PKNOX1P55347 PFN1P8-201ENST00000497012 543 ntBASIC5.15□□□□□ -1.59
PKNOX1P55347 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.15□□□□□ -1.59
PKNOX1P55347 RN7SKP70-201ENST00000516655 271 ntBASIC5.15□□□□□ -1.59
PKNOX1P55347 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.15□□□□□ -1.59
PKNOX1P55347 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.15□□□□□ -1.59
PKNOX1P55347 AP006245.2-201ENST00000522004 300 ntBASIC5.15□□□□□ -1.59
PKNOX1P55347 YWHABP2-201ENST00000540201 713 ntBASIC5.15□□□□□ -1.59
PKNOX1P55347 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.15□□□□□ -1.59
PKNOX1P55347 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PKNOX1P55347 AC011626.1-201ENST00000604710 562 ntBASIC5.15□□□□□ -1.59
PKNOX1P55347 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.15□□□□□ -1.59
PKNOX1P55347 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PKNOX1P55347 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
PKNOX1P55347 AC123912.3-201ENST00000600907 1367 ntBASIC5.15□□□□□ -1.59
PKNOX1P55347 AC025574.1-201ENST00000554784 1653 ntBASIC5.15□□□□□ -1.59
PKNOX1P55347 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PKNOX1P55347 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PKNOX1P55347 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PKNOX1P55347 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PKNOX1P55347 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PKNOX1P55347 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PKNOX1P55347 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.14□□□□□ -1.59
PKNOX1P55347 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PKNOX1P55347 AC099535.1-201ENST00000408928 371 ntBASIC5.14□□□□□ -1.59
PKNOX1P55347 RN7SKP16-201ENST00000410180 299 ntBASIC5.14□□□□□ -1.59
PKNOX1P55347 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.14□□□□□ -1.59
PKNOX1P55347 CYCSP24-201ENST00000445119 316 ntBASIC5.14□□□□□ -1.59
PKNOX1P55347 HMGN1P2-201ENST00000445197 310 ntBASIC5.14□□□□□ -1.59
PKNOX1P55347 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.14□□□□□ -1.59
PKNOX1P55347 AL157385.1-201ENST00000446973 268 ntBASIC5.14□□□□□ -1.59
PKNOX1P55347 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.14□□□□□ -1.59
PKNOX1P55347 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.14□□□□□ -1.59
PKNOX1P55347 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PKNOX1P55347 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.14□□□□□ -1.59
PKNOX1P55347 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.14□□□□□ -1.59
PKNOX1P55347 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.14□□□□□ -1.59
PKNOX1P55347 MIR4505-201ENST00000582238 73 ntBASIC5.14□□□□□ -1.59
PKNOX1P55347 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.14□□□□□ -1.59
PKNOX1P55347 AC027243.2-201ENST00000602530 724 ntBASIC5.14□□□□□ -1.59
PKNOX1P55347 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.14□□□□□ -1.59
PKNOX1P55347 AL354950.1-201ENST00000614150 568 ntBASIC5.14□□□□□ -1.59
PKNOX1P55347 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.14□□□□□ -1.59
PKNOX1P55347 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PKNOX1P55347 AL672167.1-204ENST00000641875 3017 ntBASIC5.14□□□□□ -1.59
PKNOX1P55347 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PKNOX1P55347 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PKNOX1P55347 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PKNOX1P55347 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.14□□□□□ -1.59
PKNOX1P55347 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
PKNOX1P55347 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PKNOX1P55347 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PKNOX1P55347 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.13□□□□□ -1.59
PKNOX1P55347 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.13□□□□□ -1.59
PKNOX1P55347 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PKNOX1P55347 AC091305.2-201ENST00000624049 1576 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.13□□□□□ -1.59
PKNOX1P55347 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.13□□□□□ -1.59
PKNOX1P55347 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PKNOX1P55347 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PKNOX1P55347 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PKNOX1P55347 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.13□□□□□ -1.59
PKNOX1P55347 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.13□□□□□ -1.59
PKNOX1P55347 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PKNOX1P55347 RNA5SP223-201ENST00000365174 120 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 RNA5SP284-201ENST00000384547 118 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms