Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL022394.1-201ENST00000606979 292 ntBASIC6.08□□□□□ -1.44
COPB1P53618 AC026124.2-201ENST00000621847 656 ntBASIC6.08□□□□□ -1.44
COPB1P53618 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
COPB1P53618 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COPB1P53618 DDX6P1-205ENST00000441966 1436 ntBASIC6.08□□□□□ -1.44
COPB1P53618 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.07□□□□□ -1.44
COPB1P53618 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COPB1P53618 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COPB1P53618 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COPB1P53618 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.07□□□□□ -1.44
COPB1P53618 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.07□□□□□ -1.44
COPB1P53618 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COPB1P53618 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.07□□□□□ -1.44
COPB1P53618 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPB1P53618 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
COPB1P53618 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
COPB1P53618 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPB1P53618 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPB1P53618 OR4K17-201ENST00000315543 1032 ntBASIC6.07□□□□□ -1.44
COPB1P53618 SNORD51.1-201ENST00000365405 77 ntBASIC6.07□□□□□ -1.44
COPB1P53618 RNU6-609P-201ENST00000365459 107 ntBASIC6.07□□□□□ -1.44
COPB1P53618 SNORD56.6-201ENST00000384569 71 ntBASIC6.07□□□□□ -1.44
COPB1P53618 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.07□□□□□ -1.44
COPB1P53618 MTND4LP21-201ENST00000415303 295 ntBASIC6.07□□□□□ -1.44
COPB1P53618 RPL12P43-201ENST00000420608 499 ntBASIC6.07□□□□□ -1.44
COPB1P53618 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.07□□□□□ -1.44
COPB1P53618 RPS29P14-201ENST00000431518 171 ntBASIC6.07□□□□□ -1.44
COPB1P53618 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.07□□□□□ -1.44
COPB1P53618 DNAJA1P5-201ENST00000440278 943 ntBASIC6.07□□□□□ -1.44
COPB1P53618 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.07□□□□□ -1.44
COPB1P53618 AC090602.1-201ENST00000469695 252 ntBASIC6.07□□□□□ -1.44
COPB1P53618 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.07□□□□□ -1.44
COPB1P53618 AC022215.1-201ENST00000481770 362 ntBASIC6.07□□□□□ -1.44
COPB1P53618 OR2A3P-201ENST00000493774 953 ntBASIC6.07□□□□□ -1.44
COPB1P53618 AC104109.1-201ENST00000498563 436 ntBASIC6.07□□□□□ -1.44
COPB1P53618 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COPB1P53618 AC025458.1-201ENST00000506046 166 ntBASIC6.07□□□□□ -1.44
COPB1P53618 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.07□□□□□ -1.44
COPB1P53618 AC022826.1-201ENST00000519383 805 ntBASIC6.07□□□□□ -1.44
COPB1P53618 VTA1P2-201ENST00000520205 911 ntBASIC6.07□□□□□ -1.44
COPB1P53618 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
COPB1P53618 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.07□□□□□ -1.44
COPB1P53618 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.07□□□□□ -1.44
COPB1P53618 AC027369.2-201ENST00000528030 440 ntBASIC6.07□□□□□ -1.44
COPB1P53618 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.07□□□□□ -1.44
COPB1P53618 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.07□□□□□ -1.44
COPB1P53618 AC068305.2-201ENST00000550567 1205 ntBASIC6.07□□□□□ -1.44
COPB1P53618 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.07□□□□□ -1.44
COPB1P53618 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.07□□□□□ -1.44
COPB1P53618 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.07□□□□□ -1.44
COPB1P53618 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COPB1P53618 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.07□□□□□ -1.44
COPB1P53618 AC108738.1-201ENST00000603703 237 ntBASIC6.07□□□□□ -1.44
COPB1P53618 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.07□□□□□ -1.44
COPB1P53618 MIR6862-1-201ENST00000613016 70 ntBASIC6.07□□□□□ -1.44
COPB1P53618 MIR6862-2-201ENST00000614755 70 ntBASIC6.07□□□□□ -1.44
COPB1P53618 AC025574.2-201ENST00000615621 514 ntBASIC6.07□□□□□ -1.44
COPB1P53618 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPB1P53618 AC024884.1-201ENST00000620583 399 ntBASIC6.07□□□□□ -1.44
COPB1P53618 AP000943.4-201ENST00000622912 357 ntBASIC6.07□□□□□ -1.44
COPB1P53618 AP000550.3-201ENST00000637734 379 ntBASIC6.07□□□□□ -1.44
COPB1P53618 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COPB1P53618 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.07□□□□□ -1.44
COPB1P53618 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.07□□□□□ -1.44
COPB1P53618 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPB1P53618 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COPB1P53618 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COPB1P53618 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPB1P53618 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPB1P53618 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.07□□□□□ -1.44
COPB1P53618 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COPB1P53618 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COPB1P53618 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
COPB1P53618 CASC19-255ENST00000641733 1385 ntBASIC6.06□□□□□ -1.44
COPB1P53618 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
COPB1P53618 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.06□□□□□ -1.44
COPB1P53618 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
COPB1P53618 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB1P53618 ATP5F1P6-201ENST00000402768 767 ntBASIC6.06□□□□□ -1.44
COPB1P53618 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.06□□□□□ -1.44
COPB1P53618 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.06□□□□□ -1.44
COPB1P53618 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.06□□□□□ -1.44
COPB1P53618 UBE2D3P3-201ENST00000426992 425 ntBASIC6.06□□□□□ -1.44
COPB1P53618 AL022331.1-201ENST00000429025 477 ntBASIC6.06□□□□□ -1.44
COPB1P53618 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.06□□□□□ -1.44
COPB1P53618 TXNP2-201ENST00000443918 295 ntBASIC6.06□□□□□ -1.44
COPB1P53618 CLIC4P1-201ENST00000453177 535 ntBASIC6.06□□□□□ -1.44
COPB1P53618 CBX1P2-201ENST00000453841 458 ntBASIC6.06□□□□□ -1.44
COPB1P53618 MRE11P1-201ENST00000464884 2127 ntBASIC6.06□□□□□ -1.44
COPB1P53618 RPS23P6-201ENST00000466136 431 ntBASIC6.06□□□□□ -1.44
COPB1P53618 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms