Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM23P36406 AC104260.2-201ENST00000623551 3497 ntBASIC5.41□□□□□ -1.54
TRIM23P36406 PABPC1P6-201ENST00000445594 1829 ntBASIC5.41□□□□□ -1.54
TRIM23P36406 AC004076.2-201ENST00000620532 3323 ntBASIC5.41□□□□□ -1.54
TRIM23P36406 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM23P36406 AC083899.1-201ENST00000454465 3819 ntBASIC5.41□□□□□ -1.54
TRIM23P36406 AC018809.2-201ENST00000602436 3823 ntBASIC5.41□□□□□ -1.54
TRIM23P36406 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM23P36406 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM23P36406 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM23P36406 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
TRIM23P36406 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM23P36406 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM23P36406 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM23P36406 AL590763.1-201ENST00000398297 1545 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM23P36406 RN7SKP74-201ENST00000362849 309 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
TRIM23P36406 RNU6-171P-201ENST00000384354 107 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 RNA5SP339-201ENST00000390987 122 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 AL356968.2-201ENST00000412769 1257 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 RPSAP35-201ENST00000413753 818 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM23P36406 AL691447.1-201ENST00000419456 387 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM23P36406 RPL7P56-201ENST00000429441 717 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM23P36406 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM23P36406 AC073072.2-201ENST00000447425 348 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 IGBP1P3-201ENST00000447449 1000 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM23P36406 MYO5BP2-201ENST00000449815 1277 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 RN7SL799P-201ENST00000475891 298 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 RN7SL30P-201ENST00000488416 306 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 AP000926.3-201ENST00000497201 299 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 RPEP1-201ENST00000504507 658 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM23P36406 SCARNA16.4-201ENST00000516956 187 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 CDC42P3-201ENST00000518493 633 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM23P36406 AC084824.2-201ENST00000548906 345 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM23P36406 NPM1P45-201ENST00000583151 559 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM23P36406 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
TRIM23P36406 AC009237.13-201ENST00000603193 276 ntBASIC5.4□□□□□ -1.54
TRIM23P36406 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM23P36406 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM23P36406 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
TRIM23P36406 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM23P36406 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM23P36406 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.4□□□□□ -1.55
TRIM23P36406 AC239868.2-201ENST00000564237 4527 ntBASIC5.4□□□□□ -1.55
TRIM23P36406 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.4□□□□□ -1.55
TRIM23P36406 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TRIM23P36406 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM23P36406 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM23P36406 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM23P36406 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TRIM23P36406 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM23P36406 AC005294.1-201ENST00000355509 281 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 RNU4-44P-201ENST00000363050 141 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM23P36406 AL133388.1-201ENST00000404509 287 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 RPL35AP24-201ENST00000413846 330 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 AC234781.4-201ENST00000419384 244 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 CNOT7P2-201ENST00000441051 832 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 LINC02210-201ENST00000444561 288 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM23P36406 AC002553.2-201ENST00000453217 340 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM23P36406 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM23P36406 RN7SL727P-201ENST00000482164 296 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 AC016687.1-201ENST00000482574 353 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 AC093890.1-201ENST00000502554 540 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRIM23P36406 RNU6-513P-201ENST00000516104 104 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM23P36406 IGLV2-28-201ENST00000520681 304 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM23P36406 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM23P36406 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM23P36406 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM23P36406 AC093591.2-201ENST00000565254 3843 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM23P36406 AP005403.1-201ENST00000579720 229 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM23P36406 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM23P36406 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM23P36406 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM23P36406 SNORA35B-201ENST00000607417 129 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 AC015712.7-201ENST00000615211 635 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 AC109583.2-201ENST00000617367 129 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 AC005005.4-201ENST00000623789 16698 ntBASIC5.39□□□□□ -1.55
TRIM23P36406 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM23P36406 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM23P36406 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
TRIM23P36406 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
TRIM23P36406 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
TRIM23P36406 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms