Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN6P29350 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN6P29350 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN6P29350 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN6P29350 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN6P29350 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PTPN6P29350 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN6P29350 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
PTPN6P29350 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN6P29350 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN6P29350 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN6P29350 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN6P29350 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN6P29350 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PTPN6P29350 RNU6-697P-201ENST00000363348 107 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PTPN6P29350 SNORD56.6-201ENST00000384569 71 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 RN7SKP293-201ENST00000411389 296 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN6P29350 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN6P29350 RPL7AP49-201ENST00000429522 581 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 AL591438.1-201ENST00000433508 581 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN6P29350 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.19□□□□□ -1.58
PTPN6P29350 AC016772.1-201ENST00000444170 1261 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 EEF1B2P6-201ENST00000445713 673 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.19□□□□□ -1.58
PTPN6P29350 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN6P29350 AC023141.9-201ENST00000458734 412 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.19□□□□□ -1.58
PTPN6P29350 AC087672.1-201ENST00000479876 766 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN6P29350 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN6P29350 IGBP1P4-201ENST00000503202 879 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.19□□□□□ -1.58
PTPN6P29350 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.19□□□□□ -1.58
PTPN6P29350 SNORA70.11-201ENST00000515987 138 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 SNORA70.13-201ENST00000516116 138 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 SCARNA21.2-201ENST00000516600 166 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 RNA5SP230-201ENST00000517039 122 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.19□□□□□ -1.58
PTPN6P29350 AC027369.5-201ENST00000533838 755 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.19□□□□□ -1.58
PTPN6P29350 AC125612.1-201ENST00000547580 377 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.19□□□□□ -1.58
PTPN6P29350 RN7SL290P-201ENST00000578661 300 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PTPN6P29350 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PTPN6P29350 MIR4505-201ENST00000582238 73 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.19□□□□□ -1.58
PTPN6P29350 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.19□□□□□ -1.58
PTPN6P29350 AP000769.2-201ENST00000602344 396 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN6P29350 AC107905.1-201ENST00000616204 426 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN6P29350 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN6P29350 uc_338.7-201ENST00000621834 124 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 MTCO1P1-201ENST00000624263 1081 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 AL390318.1-201ENST00000624564 687 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.19□□□□□ -1.58
PTPN6P29350 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PTPN6P29350 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN6P29350 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN6P29350 AL078621.3-201ENST00000623707 2042 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN6P29350 OR9K1P-202ENST00000641111 3217 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PTPN6P29350 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN6P29350 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN6P29350 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PTPN6P29350 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
PTPN6P29350 MAPK10-328ENST00000641553 4009 ntBASIC5.19□□□□□ -1.58
PTPN6P29350 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN6P29350 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN6P29350 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN6P29350 SAMMSON-213ENST00000641336 1521 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PTPN6P29350 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.18□□□□□ -1.58
PTPN6P29350 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN6P29350 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN6P29350 SRRM1P3-201ENST00000426911 2678 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.18□□□□□ -1.58
PTPN6P29350 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.18□□□□□ -1.58
PTPN6P29350 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
PTPN6P29350 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PTPN6P29350 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PTPN6P29350 SNORA51.1-201ENST00000363243 140 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 RNA5SP242-201ENST00000364171 118 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 AL353625.1-202ENST00000366273 571 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 RNA5SP187-201ENST00000384400 119 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN6P29350 AC104297.1-201ENST00000393779 870 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 RMRPP5-201ENST00000411156 267 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 AL596448.1-201ENST00000415024 392 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 AC017019.1-201ENST00000426129 261 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.18□□□□□ -1.58
PTPN6P29350 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.18□□□□□ -1.58
PTPN6P29350 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN6P29350 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN6P29350 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms