Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.46□□□□□ -1.54
TNFSF4P23510 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF4P23510 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF4P23510 AC018645.1-201ENST00000505003 109 ntBASIC5.46□□□□□ -1.54
TNFSF4P23510 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF4P23510 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF4P23510 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF4P23510 RNA5SP418-201ENST00000515951 117 ntBASIC5.46□□□□□ -1.54
TNFSF4P23510 SNORA74.1-201ENST00000516320 180 ntBASIC5.46□□□□□ -1.54
TNFSF4P23510 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.46□□□□□ -1.54
TNFSF4P23510 COX6B1P4-201ENST00000519826 484 ntBASIC5.46□□□□□ -1.54
TNFSF4P23510 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.46□□□□□ -1.54
TNFSF4P23510 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.46□□□□□ -1.54
TNFSF4P23510 KCTD9P4-201ENST00000526766 1166 ntBASIC5.46□□□□□ -1.54
TNFSF4P23510 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.46□□□□□ -1.54
TNFSF4P23510 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF4P23510 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.46□□□□□ -1.54
TNFSF4P23510 NIFKP8-201ENST00000560500 874 ntBASIC5.46□□□□□ -1.54
TNFSF4P23510 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.46□□□□□ -1.54
TNFSF4P23510 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF4P23510 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.46□□□□□ -1.54
TNFSF4P23510 MTATP6P24-201ENST00000576835 677 ntBASIC5.46□□□□□ -1.54
TNFSF4P23510 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.46□□□□□ -1.54
TNFSF4P23510 AC090616.1-201ENST00000583895 447 ntBASIC5.46□□□□□ -1.54
TNFSF4P23510 AC015802.2-201ENST00000589690 189 ntBASIC5.46□□□□□ -1.54
TNFSF4P23510 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.46□□□□□ -1.54
TNFSF4P23510 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.46□□□□□ -1.54
TNFSF4P23510 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.46□□□□□ -1.54
TNFSF4P23510 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
TNFSF4P23510 AC098935.2-201ENST00000604222 466 ntBASIC5.46□□□□□ -1.54
TNFSF4P23510 AC010200.2-201ENST00000605098 235 ntBASIC5.46□□□□□ -1.54
TNFSF4P23510 AL583856.2-201ENST00000606298 543 ntBASIC5.46□□□□□ -1.54
TNFSF4P23510 AL138960.1-201ENST00000613838 513 ntBASIC5.46□□□□□ -1.54
TNFSF4P23510 CR392039.4-201ENST00000624968 501 ntBASIC5.46□□□□□ -1.54
TNFSF4P23510 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.46□□□□□ -1.54
TNFSF4P23510 AC090897.3-201ENST00000636973 1157 ntBASIC5.46□□□□□ -1.54
TNFSF4P23510 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
TNFSF4P23510 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.46□□□□□ -1.54
TNFSF4P23510 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
TNFSF4P23510 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.46□□□□□ -1.54
TNFSF4P23510 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF4P23510 ASNSP1-204ENST00000641977 1664 ntBASIC5.46□□□□□ -1.54
TNFSF4P23510 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
TNFSF4P23510 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF4P23510 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.46□□□□□ -1.54
TNFSF4P23510 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.54
TNFSF4P23510 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.46□□□□□ -1.54
TNFSF4P23510 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF4P23510 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF4P23510 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF4P23510 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF4P23510 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFSF4P23510 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TNFSF4P23510 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF4P23510 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF4P23510 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TNFSF4P23510 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TNFSF4P23510 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF4P23510 AC079753.1-201ENST00000623243 3868 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 NLRP3P1-201ENST00000622303 1785 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TNFSF4P23510 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFSF4P23510 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF4P23510 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TNFSF4P23510 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF4P23510 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF4P23510 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TNFSF4P23510 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.45□□□□□ -1.54
TNFSF4P23510 RN7SKP250-201ENST00000363924 321 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 RNA5SP512-201ENST00000364550 120 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 RNA5SP478-201ENST00000364657 115 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF4P23510 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFSF4P23510 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TNFSF4P23510 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
TNFSF4P23510 MTCO2P31-201ENST00000402702 684 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFSF4P23510 AL136310.1-201ENST00000404926 654 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 RN7SKP59-201ENST00000410520 314 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 RN7SKP97-201ENST00000410966 333 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 RNU4-22P-201ENST00000411058 166 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 Z75741.2-201ENST00000417272 1167 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFSF4P23510 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF4P23510 AL009174.1-201ENST00000426577 416 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.45□□□□□ -1.54
TNFSF4P23510 NPM1P24-201ENST00000428039 894 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 ACTR3P2-201ENST00000439585 1257 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 DNAJC19P5-201ENST00000443295 316 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 AC097463.1-201ENST00000447288 481 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.45□□□□□ -1.54
TNFSF4P23510 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.45□□□□□ -1.54
TNFSF4P23510 RN7SL809P-201ENST00000482040 297 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFSF4P23510 RPL9P15-201ENST00000491096 532 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.45□□□□□ -1.54
TNFSF4P23510 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFSF4P23510 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFSF4P23510 AC010343.2-201ENST00000510162 224 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 EEF1A1P37-201ENST00000522748 715 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms