Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RNA5SP319-201ENST00000362768 119 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 RNA5SP234-201ENST00000363916 119 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 GABARAPL3-201ENST00000412799 354 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 NPM1P18-201ENST00000434232 732 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 Z85994.2-201ENST00000434327 452 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 AL138787.1-202ENST00000437804 898 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 MED28P3-201ENST00000444288 531 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.71□□□□□ -1.5
PDGFRAP16234 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.71□□□□□ -1.5
PDGFRAP16234 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.71□□□□□ -1.5
PDGFRAP16234 AC100832.1-201ENST00000471945 383 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 SIAH1P1-201ENST00000479411 923 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 RN7SL547P-201ENST00000490793 290 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 AC109464.1-201ENST00000511091 819 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 MTND6P2-201ENST00000512226 524 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 AC078878.1-201ENST00000539832 958 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.71□□□□□ -1.5
PDGFRAP16234 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.71□□□□□ -1.5
PDGFRAP16234 MIR4489-201ENST00000578869 62 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.71□□□□□ -1.5
PDGFRAP16234 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.71□□□□□ -1.5
PDGFRAP16234 AC020915.5-201ENST00000596836 964 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFRAP16234 AP000769.2-201ENST00000602344 396 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 AC067838.1-201ENST00000606064 577 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 AP000864.1-201ENST00000609424 650 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.71□□□□□ -1.5
PDGFRAP16234 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFRAP16234 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PDGFRAP16234 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFRAP16234 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
PDGFRAP16234 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.71□□□□□ -1.5
PDGFRAP16234 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFRAP16234 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFRAP16234 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PDGFRAP16234 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFRAP16234 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFRAP16234 AC100757.1-201ENST00000616872 1835 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFRAP16234 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PDGFRAP16234 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFRAP16234 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFRAP16234 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFRAP16234 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFRAP16234 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.7□□□□□ -1.5
PDGFRAP16234 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFRAP16234 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.7□□□□□ -1.5
PDGFRAP16234 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PDGFRAP16234 SAMM50P1-201ENST00000455403 1399 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PDGFRAP16234 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFRAP16234 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFRAP16234 AC003973.3-201ENST00000624863 2822 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 RNU6-386P-201ENST00000362650 107 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 RNU6-670P-201ENST00000364312 104 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFRAP16234 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFRAP16234 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFRAP16234 AL391361.1-201ENST00000405580 489 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 RN7SKP59-201ENST00000410520 314 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 SEPT7P8-201ENST00000413308 775 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 PTP4A1P1-201ENST00000420539 515 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFRAP16234 AC009784.1-201ENST00000426484 460 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFRAP16234 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFRAP16234 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFRAP16234 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.7□□□□□ -1.5
PDGFRAP16234 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFRAP16234 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFRAP16234 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFRAP16234 AC239798.3-201ENST00000454459 408 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 C1DP3-201ENST00000455013 423 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 RN7SL51P-201ENST00000468230 285 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PDGFRAP16234 AC093827.1-201ENST00000480094 861 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 AC108693.1-201ENST00000496068 432 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 AC090638.1-201ENST00000498296 909 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.7□□□□□ -1.5
PDGFRAP16234 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFRAP16234 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
PDGFRAP16234 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFRAP16234 AC117525.1-201ENST00000515228 503 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 SCARNA16.4-201ENST00000516956 187 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 SCARNA20.4-201ENST00000516969 131 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 SEPT10P1-201ENST00000517342 1162 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.7□□□□□ -1.5
PDGFRAP16234 OR8G3P-201ENST00000533406 921 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFRAP16234 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFRAP16234 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 OR11H3P-201ENST00000554547 982 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFRAP16234 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFRAP16234 AC007225.2-201ENST00000562529 256 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFRAP16234 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFRAP16234 AP002884.5-201ENST00000595053 1132 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms