Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DPB1P04440 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DPB1P04440 AP005403.1-201ENST00000579720 229 ntBASIC4.74□□□□□ -1.65
HLA-DPB1P04440 RN7SL356P-201ENST00000582228 248 ntBASIC4.74□□□□□ -1.65
HLA-DPB1P04440 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DPB1P04440 AP000769.2-201ENST00000602344 396 ntBASIC4.74□□□□□ -1.65
HLA-DPB1P04440 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DPB1P04440 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DPB1P04440 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DPB1P04440 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DPB1P04440 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DPB1P04440 AL672167.1-204ENST00000641875 3017 ntBASIC4.74□□□□□ -1.65
HLA-DPB1P04440 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DPB1P04440 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HLA-DPB1P04440 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 MRRFP1-201ENST00000435941 1675 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 RN7SKP28-201ENST00000364770 305 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AL078599.1-201ENST00000402075 293 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 SNORA11.3-201ENST00000408471 128 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 RN7SKP286-201ENST00000410894 299 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 SDHDP6-201ENST00000414693 480 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AL596448.1-201ENST00000415024 392 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AC104843.2-201ENST00000427666 297 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 RPL12P11-201ENST00000439970 501 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AC092754.1-201ENST00000472975 479 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 CBX1P5-201ENST00000475330 559 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 RN7SL814P-201ENST00000487715 300 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AC074087.1-201ENST00000512059 724 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AC020937.1-201ENST00000519677 1013 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 PPATP2-201ENST00000605635 508 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AC018690.1-201ENST00000608144 626 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AC126175.1-201ENST00000617041 758 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 SNORA11.6-201ENST00000619030 128 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AL357153.4-201ENST00000620487 1016 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AL512356.3-201ENST00000623005 461 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AC011447.7-201ENST00000624228 1590 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AC023421.1-201ENST00000590535 1785 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AP000542.2-201ENST00000623199 6179 ntBASIC4.73□□□□□ -1.65
HLA-DPB1P04440 AL353796.1-201ENST00000561542 3241 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 RN7SKP6-201ENST00000364795 319 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 GAPDHP42-201ENST00000406848 981 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 CDY17P-201ENST00000414121 1282 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 BMS1P17-202ENST00000416720 316 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 REREP1Y-201ENST00000422655 198 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AL389925.1-201ENST00000432257 728 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 OR6D1P-201ENST00000436165 939 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 RPL35AP21-201ENST00000437667 333 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 REREP2Y-201ENST00000439103 200 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AC019185.1-201ENST00000442718 389 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AP000281.1-201ENST00000444036 316 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 BX842559.2-201ENST00000451418 605 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 SETP20-201ENST00000457046 852 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AC104109.1-201ENST00000498563 436 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms