Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 USP48-203ENST00000374732 3037 ntTSL 2 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 GMFG-201ENST00000253054 616 ntTSL 5 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 RNU6-1017P-201ENST00000363613 106 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 SNORA68-201ENST00000384437 133 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 RPS10P21-201ENST00000430654 475 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 OR7A15P-201ENST00000449848 1009 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 Z83838.1-202ENST00000456225 839 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 AC022364.2-201ENST00000457963 554 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 RN7SL569P-201ENST00000494652 288 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 AC108078.1-201ENST00000508073 725 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 AC106800.2-201ENST00000514009 1103 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 IGKV3D-34-201ENST00000522638 302 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 AP001893.2-201ENST00000526949 202 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 MYL2-203ENST00000548438 664 ntTSL 3 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 AL163952.1-202ENST00000569625 600 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 AC023513.1-201ENST00000604396 691 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 AC004241.2-201ENST00000614562 444 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 MIR7854-201ENST00000620068 65 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 AC017007.4-201ENST00000503353 1352 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
ALDH1A1P00352 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ALDH1A1P00352 TNFSF15-201ENST00000374044 2789 ntBASIC8.05□□□□□ -1.12
ALDH1A1P00352 OR4G11P-202ENST00000642116 1414 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC8.04□□□□□ -1.12
ALDH1A1P00352 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ALDH1A1P00352 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ALDH1A1P00352 CR383658.2-201ENST00000547576 1525 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ALDH1A1P00352 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ALDH1A1P00352 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
ALDH1A1P00352 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.04□□□□□ -1.12
ALDH1A1P00352 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ALDH1A1P00352 Y_RNA.58-201ENST00000362807 102 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 Y_RNA.154-201ENST00000363624 102 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 RN7SKP107-201ENST00000364157 290 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 RNA5SP140-201ENST00000364524 92 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 RNY3P1-201ENST00000365085 102 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 RNY3-201ENST00000365484 102 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 ESD-201ENST00000378697 1079 ntTSL 5 BASIC8.04□□□□□ -1.12
ALDH1A1P00352 RNU6-877P-201ENST00000383868 107 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 Y_RNA.490-201ENST00000384413 102 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC8.04□□□□□ -1.12
ALDH1A1P00352 PIGPP2-201ENST00000411569 458 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 HSD17B7P1-201ENST00000412419 1017 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ALDH1A1P00352 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC8.04□□□□□ -1.12
ALDH1A1P00352 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ALDH1A1P00352 GTF2IP23-201ENST00000423746 351 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 VN1R20P-201ENST00000425215 966 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 IGLV3-4-201ENST00000432300 244 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 AL022238.1-201ENST00000442557 355 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 RPL7P31-201ENST00000450192 724 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 SULT1D1P-201ENST00000458020 882 ntBASIC8.04□□□□□ -1.12
ALDH1A1P00352 RN7SL180P-201ENST00000466769 294 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms