Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 FTH1P8-201ENST00000498161 514 ntBASIC8.06□□□□□ -1.12
RAPGEF3O95398 SLC25A15P5-201ENST00000508033 253 ntBASIC8.06□□□□□ -1.12
RAPGEF3O95398 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 AP003117.1-201ENST00000602771 554 ntBASIC8.06□□□□□ -1.12
RAPGEF3O95398 AC020765.1-201ENST00000604296 328 ntBASIC8.06□□□□□ -1.12
RAPGEF3O95398 AL590392.1-201ENST00000604960 446 ntBASIC8.06□□□□□ -1.12
RAPGEF3O95398 AC242628.1-201ENST00000606810 391 ntBASIC8.06□□□□□ -1.12
RAPGEF3O95398 AP003789.1-201ENST00000617737 605 ntBASIC8.06□□□□□ -1.12
RAPGEF3O95398 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RAPGEF3O95398 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RAPGEF3O95398 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RAPGEF3O95398 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RAPGEF3O95398 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 NXF4-202ENST00000416098 1465 ntBASIC8.06□□□□□ -1.12
RAPGEF3O95398 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RAPGEF3O95398 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 KYNUP3-201ENST00000574386 1341 ntBASIC8.05□□□□□ -1.12
RAPGEF3O95398 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC8.05□□□□□ -1.12
RAPGEF3O95398 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
RAPGEF3O95398 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
RAPGEF3O95398 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RAPGEF3O95398 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RAPGEF3O95398 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC8.05□□□□□ -1.12
RAPGEF3O95398 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RAPGEF3O95398 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RAPGEF3O95398 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.05□□□□□ -1.12
RAPGEF3O95398 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
RAPGEF3O95398 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
RAPGEF3O95398 U3.3-201ENST00000362986 216 ntBASIC8.05□□□□□ -1.12
RAPGEF3O95398 RPL17P36-201ENST00000420302 549 ntBASIC8.05□□□□□ -1.12
RAPGEF3O95398 GTF2IP2-201ENST00000424290 697 ntBASIC8.05□□□□□ -1.12
RAPGEF3O95398 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC8.05□□□□□ -1.12
RAPGEF3O95398 RPS27AP6-201ENST00000427962 448 ntBASIC8.05□□□□□ -1.12
RAPGEF3O95398 AC239367.2-201ENST00000447309 705 ntBASIC8.05□□□□□ -1.12
RAPGEF3O95398 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC8.05□□□□□ -1.12
RAPGEF3O95398 MTND5P8-201ENST00000449817 1083 ntBASIC8.05□□□□□ -1.12
RAPGEF3O95398 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC8.05□□□□□ -1.12
RAPGEF3O95398 RN7SL41P-201ENST00000476144 297 ntBASIC8.05□□□□□ -1.12
RAPGEF3O95398 AC058823.1-201ENST00000485315 474 ntBASIC8.05□□□□□ -1.12
RAPGEF3O95398 AC117525.1-201ENST00000515228 503 ntBASIC8.05□□□□□ -1.12
RAPGEF3O95398 RNU6-760P-201ENST00000516078 97 ntBASIC8.05□□□□□ -1.12
RAPGEF3O95398 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC8.05□□□□□ -1.12
RAPGEF3O95398 AP000769.2-201ENST00000602344 396 ntBASIC8.05□□□□□ -1.12
RAPGEF3O95398 OR4H6P-202ENST00000603819 340 ntBASIC8.05□□□□□ -1.12
RAPGEF3O95398 MEMO1P5-201ENST00000604810 406 ntBASIC8.05□□□□□ -1.12
RAPGEF3O95398 BNIP3P19-201ENST00000605397 577 ntBASIC8.05□□□□□ -1.12
RAPGEF3O95398 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
RAPGEF3O95398 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
RAPGEF3O95398 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RAPGEF3O95398 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RAPGEF3O95398 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RAPGEF3O95398 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RAPGEF3O95398 AL592494.2-201ENST00000425455 1548 ntBASIC8.04□□□□□ -1.12
RAPGEF3O95398 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RAPGEF3O95398 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
RAPGEF3O95398 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RAPGEF3O95398 FHIT-201ENST00000341848 174 ntTSL 3 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RAPGEF3O95398 NUDT19P3-201ENST00000404698 555 ntBASIC8.04□□□□□ -1.12
RAPGEF3O95398 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 DDX39BP1-205ENST00000422507 192 ntBASIC8.04□□□□□ -1.12
RAPGEF3O95398 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 AC018635.1-201ENST00000468292 1030 ntBASIC8.04□□□□□ -1.12
RAPGEF3O95398 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 AP000797.2-201ENST00000475768 606 ntBASIC8.04□□□□□ -1.12
RAPGEF3O95398 AC015908.1-201ENST00000478739 476 ntBASIC8.04□□□□□ -1.12
RAPGEF3O95398 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 AC140172.1-201ENST00000502928 141 ntBASIC8.04□□□□□ -1.12
RAPGEF3O95398 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 H3F3BP2-201ENST00000583907 357 ntBASIC8.04□□□□□ -1.12
RAPGEF3O95398 AC006115.2-201ENST00000596823 202 ntBASIC8.04□□□□□ -1.12
RAPGEF3O95398 AL020997.2-201ENST00000602607 184 ntBASIC8.04□□□□□ -1.12
RAPGEF3O95398 AL445423.1-201ENST00000609941 536 ntBASIC8.04□□□□□ -1.12
RAPGEF3O95398 AC026367.3-201ENST00000619032 590 ntBASIC8.04□□□□□ -1.12
RAPGEF3O95398 AC097372.4-201ENST00000625025 466 ntBASIC8.04□□□□□ -1.12
RAPGEF3O95398 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC8.04□□□□□ -1.12
RAPGEF3O95398 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
RAPGEF3O95398 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms