Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.1□□□□□ -1.59
HCN1O60741 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
HCN1O60741 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HCN1O60741 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HCN1O60741 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HCN1O60741 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
HCN1O60741 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HCN1O60741 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HCN1O60741 RNA5SP319-201ENST00000362768 119 ntBASIC5.1□□□□□ -1.59
HCN1O60741 RN7SKP162-201ENST00000363605 345 ntBASIC5.1□□□□□ -1.59
HCN1O60741 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HCN1O60741 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.1□□□□□ -1.59
HCN1O60741 NPM1P4-201ENST00000414095 812 ntBASIC5.1□□□□□ -1.59
HCN1O60741 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.1□□□□□ -1.59
HCN1O60741 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HCN1O60741 RIMKLBP2-201ENST00000424737 654 ntBASIC5.1□□□□□ -1.59
HCN1O60741 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.1□□□□□ -1.59
HCN1O60741 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.1□□□□□ -1.59
HCN1O60741 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.1□□□□□ -1.59
HCN1O60741 SNRPFP2-201ENST00000440710 251 ntBASIC5.1□□□□□ -1.59
HCN1O60741 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HCN1O60741 IGBP1P3-201ENST00000447449 1000 ntBASIC5.1□□□□□ -1.59
HCN1O60741 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.1□□□□□ -1.59
HCN1O60741 AC007386.1-201ENST00000455212 582 ntBASIC5.1□□□□□ -1.59
HCN1O60741 RPS26P39-201ENST00000469206 341 ntBASIC5.1□□□□□ -1.59
HCN1O60741 AC100832.1-201ENST00000471945 383 ntBASIC5.1□□□□□ -1.59
HCN1O60741 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
HCN1O60741 RN7SL184P-201ENST00000488308 297 ntBASIC5.1□□□□□ -1.59
HCN1O60741 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HCN1O60741 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.1□□□□□ -1.59
HCN1O60741 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HCN1O60741 RN7SKP253-201ENST00000516424 309 ntBASIC5.1□□□□□ -1.59
HCN1O60741 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.1□□□□□ -1.59
HCN1O60741 OR8A2P-201ENST00000528631 952 ntBASIC5.1□□□□□ -1.59
HCN1O60741 OR5AM1P-201ENST00000532136 1032 ntBASIC5.1□□□□□ -1.59
HCN1O60741 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.1□□□□□ -1.59
HCN1O60741 AC068993.1-201ENST00000546724 589 ntBASIC5.1□□□□□ -1.59
HCN1O60741 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.1□□□□□ -1.59
HCN1O60741 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
HCN1O60741 NMNAT1P5-201ENST00000559657 841 ntBASIC5.1□□□□□ -1.59
HCN1O60741 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.1□□□□□ -1.59
HCN1O60741 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.1□□□□□ -1.59
HCN1O60741 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.1□□□□□ -1.59
HCN1O60741 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.1□□□□□ -1.59
HCN1O60741 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HCN1O60741 MIR4489-201ENST00000578869 62 ntBASIC5.1□□□□□ -1.59
HCN1O60741 MIR4311-201ENST00000580794 100 ntBASIC5.1□□□□□ -1.59
HCN1O60741 H3F3BP2-201ENST00000583907 357 ntBASIC5.1□□□□□ -1.59
HCN1O60741 MIR7853-201ENST00000584820 132 ntBASIC5.1□□□□□ -1.59
HCN1O60741 AC010245.2-201ENST00000606908 1167 ntBASIC5.1□□□□□ -1.59
HCN1O60741 AL512624.1-201ENST00000613638 469 ntBASIC5.1□□□□□ -1.59
HCN1O60741 AC022960.2-201ENST00000616300 666 ntBASIC5.1□□□□□ -1.59
HCN1O60741 FRG1EP-201ENST00000634469 770 ntBASIC5.1□□□□□ -1.59
HCN1O60741 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.1□□□□□ -1.59
HCN1O60741 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HCN1O60741 AL353796.1-201ENST00000561542 3241 ntBASIC5.1□□□□□ -1.59
HCN1O60741 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
HCN1O60741 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
HCN1O60741 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
HCN1O60741 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HCN1O60741 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HCN1O60741 AC019072.1-201ENST00000604535 1551 ntBASIC5.09□□□□□ -1.59
HCN1O60741 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HCN1O60741 Z83820.1-201ENST00000456978 1499 ntBASIC5.09□□□□□ -1.59
HCN1O60741 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
HCN1O60741 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HCN1O60741 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HCN1O60741 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.09□□□□□ -1.59
HCN1O60741 GAPDHP24-201ENST00000328713 983 ntBASIC5.09□□□□□ -1.59
HCN1O60741 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.09□□□□□ -1.59
HCN1O60741 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HCN1O60741 RPS6P23-201ENST00000413224 722 ntBASIC5.09□□□□□ -1.59
HCN1O60741 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.09□□□□□ -1.59
HCN1O60741 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.09□□□□□ -1.59
HCN1O60741 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.09□□□□□ -1.59
HCN1O60741 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.09□□□□□ -1.59
HCN1O60741 AC012075.1-201ENST00000436549 580 ntBASIC5.09□□□□□ -1.59
HCN1O60741 AC006335.2-201ENST00000437993 330 ntBASIC5.09□□□□□ -1.59
HCN1O60741 AL390119.1-201ENST00000440329 312 ntBASIC5.09□□□□□ -1.59
HCN1O60741 AC073465.2-201ENST00000440938 498 ntBASIC5.09□□□□□ -1.59
HCN1O60741 AL163193.1-201ENST00000444895 788 ntBASIC5.09□□□□□ -1.59
HCN1O60741 RN7SL51P-201ENST00000468230 285 ntBASIC5.09□□□□□ -1.59
HCN1O60741 IGLV2-28-201ENST00000520681 304 ntBASIC5.09□□□□□ -1.59
HCN1O60741 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.09□□□□□ -1.59
HCN1O60741 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.09□□□□□ -1.59
HCN1O60741 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HCN1O60741 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.09□□□□□ -1.59
HCN1O60741 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.09□□□□□ -1.59
HCN1O60741 AC115989.2-201ENST00000578640 563 ntBASIC5.09□□□□□ -1.59
HCN1O60741 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.09□□□□□ -1.59
HCN1O60741 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.09□□□□□ -1.59
HCN1O60741 AL122125.1-201ENST00000616999 600 ntBASIC5.09□□□□□ -1.59
HCN1O60741 MIR8080-201ENST00000622224 89 ntBASIC5.09□□□□□ -1.59
HCN1O60741 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HCN1O60741 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.09□□□□□ -1.59
HCN1O60741 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HCN1O60741 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.09□□□□□ -1.59
HCN1O60741 AC112255.1-201ENST00000624070 2493 ntBASIC5.09□□□□□ -1.59
HCN1O60741 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HCN1O60741 PWAR1-201ENST00000624188 2414 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms