Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC027796.1-201ENST00000575593 512 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC8.03□□□□□ -1.12
HOXA2O43364 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC8.03□□□□□ -1.12
HOXA2O43364 MIR3668-201ENST00000582138 75 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 MRPS5P4-201ENST00000592830 325 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC8.03□□□□□ -1.12
HOXA2O43364 AC007621.1-201ENST00000604544 437 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 AC113361.1-201ENST00000606683 543 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 AL355802.3-201ENST00000607571 545 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC8.03□□□□□ -1.12
HOXA2O43364 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC8.03□□□□□ -1.12
HOXA2O43364 AC040896.1-201ENST00000613819 479 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
HOXA2O43364 uc_338.21-201ENST00000622458 147 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 AL683826.1-201ENST00000624104 627 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 AC005618.4-201ENST00000625053 554 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC8.03□□□□□ -1.12
HOXA2O43364 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC8.03□□□□□ -1.12
HOXA2O43364 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.03□□□□□ -1.12
HOXA2O43364 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC8.03□□□□□ -1.12
HOXA2O43364 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
HOXA2O43364 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC8.03□□□□□ -1.12
HOXA2O43364 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.03□□□□□ -1.12
HOXA2O43364 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC8.03□□□□□ -1.12
HOXA2O43364 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC8.03□□□□□ -1.12
HOXA2O43364 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC8.02□□□□□ -1.12
HOXA2O43364 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.02□□□□□ -1.12
HOXA2O43364 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
HOXA2O43364 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8.02□□□□□ -1.12
HOXA2O43364 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HOXA2O43364 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
HOXA2O43364 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HOXA2O43364 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC8.02□□□□□ -1.13
HOXA2O43364 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HOXA2O43364 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.02□□□□□ -1.13
HOXA2O43364 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HOXA2O43364 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HOXA2O43364 ICE2P1-201ENST00000512800 1849 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HOXA2O43364 RNU4-81P-201ENST00000363561 144 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 RNU12-2P-201ENST00000364789 156 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HOXA2O43364 CUBN-201ENST00000377823 705 ntTSL 3 BASIC8.02□□□□□ -1.13
HOXA2O43364 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC8.02□□□□□ -1.13
HOXA2O43364 RPL26P29-201ENST00000415623 438 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 ISCA1P6-201ENST00000427740 390 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 AC073900.1-201ENST00000429766 776 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC8.02□□□□□ -1.13
HOXA2O43364 RPL14P5-201ENST00000436474 730 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 RPL26P28-201ENST00000451325 435 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 AC099563.1-201ENST00000456086 418 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
HOXA2O43364 AC096741.1-201ENST00000472250 846 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC8.02□□□□□ -1.13
HOXA2O43364 AC093278.1-201ENST00000494700 600 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 OR7E163P-201ENST00000505943 894 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC8.02□□□□□ -1.13
HOXA2O43364 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC8.02□□□□□ -1.13
HOXA2O43364 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC8.02□□□□□ -1.13
HOXA2O43364 RNU6-1261P-201ENST00000517194 104 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 IGHV3-63-201ENST00000518422 341 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 AP003467.2-201ENST00000520175 319 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 IGKV2-29-201ENST00000521304 372 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC8.02□□□□□ -1.13
HOXA2O43364 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
HOXA2O43364 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8.02□□□□□ -1.13
HOXA2O43364 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC8.02□□□□□ -1.13
HOXA2O43364 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC8.02□□□□□ -1.13
HOXA2O43364 AC122134.1-201ENST00000565664 1104 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 CYP4A44P-201ENST00000569984 154 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 XIST-210ENST00000602863 775 ntTSL 3 BASIC8.02□□□□□ -1.13
HOXA2O43364 AL391646.1-201ENST00000603860 190 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC8.02□□□□□ -1.13
HOXA2O43364 AL603758.1-201ENST00000618654 241 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
HOXA2O43364 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 AL132796.3-201ENST00000624703 900 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC8.02□□□□□ -1.13
HOXA2O43364 AC183089.2-201ENST00000637931 916 ntBASIC8.02□□□□□ -1.13
HOXA2O43364 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC8.02□□□□□ -1.13
HOXA2O43364 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC8.02□□□□□ -1.13
HOXA2O43364 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.02□□□□□ -1.13
HOXA2O43364 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HOXA2O43364 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HOXA2O43364 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HOXA2O43364 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
HOXA2O43364 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HOXA2O43364 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
HOXA2O43364 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HOXA2O43364 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HOXA2O43364 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HOXA2O43364 DBF4P1-201ENST00000412976 1892 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms